Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05395 ATGGATTGGTTAGCCAACCGTTGGACTGGCGTTGCAGCCGGAATATGGATCCAGTGGAGCTGCGGTGCATCATACACCTTCAGCATCTACTCTCCTCTCCTCAAATCCACACAAAACTACAACCAATCAACGCTCGACACTGTCTCCGTATTCAAAGACATTGGCGCCAACTTCGGCGTCCTCTCCGGCCTCCTTTACTCCGCTGTCACACCTTACGGTGACCGCCCACTTCCGTCCAATAAGTCTAAATGGAGTTCCCTTGGTGGGCCTTGGATTGTTGTGGTTGCCGGTGCTGTTCAGATCTTTGTGGGCTTTTTCTTCATTTGGGCTTCTGTTGTGGGCTTGATCCATCAGCCTCCTGTTCCAGTCATGTGCTTTTTTGCTTGGCTTGCTGCTAATGGTCAGGCTTTTTTGAATACTACAAATGTTGTTACTGGGTTGCGTAATTTTCCTCAATATAGTGGCACCATCATTGGTATCATGAAGGGTTTTCTTGGGCTTAGTGGAGCTATCTTGATTCAACTGTATCACACATTTTTCGATGGTGACCCAGCCACCTTCCTTCTGATGCTAGCTTGTTTACCTGCAACCATCTCTGTGTTATTTATGTTTCTGGTGAGGATCTATCAAGTGCAAGACTGTGATTACAAGAAGCATTTAGATGATTTCTCTGTGGTAACTATCATTATTGTTGTGTATCTCATGTTCATAATAGTTTTGCAAAACTTTGGGAGCTTACCGTATTGGGCAGGCGTTTTTACATTTGTGATCCTTATGGTTCTACTAGCATCGCCTTTTGGCATTGCCGTGAAAGCTTATTGGGAGGACTCGAGGATATTTTCACAAGCTCCCTCCATTGAGACGGCTGCACCTTCAATAGAATACCAAGAGCTGCCAAGAGAGGAGGTGCAAGTACAGGATATGTCAGGTGATGTGTTGCCCCTTGAACAAGAAATGAACCTATTACAAGCTATGTGTACTGTTGAGTTTTGGATGTTGTTTGTAACCATGATAGCCGGTTTGGGTTCTGGGCTTTCGATGATAAATAATATGAGCCAGATAGGAGAATCTCTTGGGTATAGTGCTATTGAGATTGGCAATATGGTGTCATTGTGGAGTATGTGGAATTTTCTCGGCCGTTTTGCTGGCGGCCGTGTATCTGATTATATCATGCAAAGAGGTTGGCCACGGCCCCTGTTGTTGACTGTAACTCTGGGATTTACGATTCTTGGTCATTTAATCATAGCTTCTGGTTTTCCTGGAAATTTTTATTTGGGTCCTGTCCTGGTGGGAATATGCTATGGTACAAATTGGTCCTTAATGCCAACAATCACTTCTGAGATATTTGGTGTGAAGCACATGGGTACCATTTTCAACACTATTGCTGCTTCAAGTCCACTTGGGTCGTATATACTTTCTGTGAGAGTTGTTGGATATATATACGACAAGGAAGCCAACAAAGAAGATAACTCATGCTTCGGCATCCATTGTTTCATGTTGTCGTTTCTGATTTTGGCTGGTGTAACTTTTCTAGCATTTTTGggttttggtttcCATCTTCCTATAAATCCTGACTCAGAGAAATTACGGCTTCTTActcttcttctccatctcaAACAAAAATCGAATCCaagGTTTTGTGatatagaagaagaagatggcAACAGTACCTGGTCCACTTGTTTGGGAGATCGTGAAGAGGAACAACTCTTTTTTGGTTAA 1722 0.421 MDWLANRWTGVAAGIWIQWSCGASYTFSIYSPLLKSTQNYNQSTLDTVSVFKDIGANFGVLSGLLYSAVTPYGDRPLPSNKSKWSSLGGPWIVVVAGAVQIFVGFFFIWASVVGLIHQPPVPVMCFFAWLAANGQAFLNTTNVVTGLRNFPQYSGTIIGIMKGFLGLSGAILIQLYHTFFDGDPATFLLMLACLPATISVLFMFLVRIYQVQDCDYKKHLDDFSVVTIIIVVYLMFIIVLQNFGSLPYWAGVFTFVILMVLLASPFGIAVKAYWEDSRIFSQAPSIETAAPSIEYQELPREEVQVQDMSGDVLPLEQEMNLLQAMCTVEFWMLFVTMIAGLGSGLSMINNMSQIGESLGYSAIEIGNMVSLWSMWNFLGRFAGGRVSDYIMQRGWPRPLLLTVTLGFTILGHLIIASGFPGNFYLGPVLVGICYGTNWSLMPTITSEIFGVKHMGTIFNTIAASSPLGSYILSVRVVGYIYDKEANKEDNSCFGIHCFMLSFLILAGVTFLAFLGFGFHLPINPDSEKLRLLTLLLHLKQKSNPRFCDIEEEDGNSTWSTCLGDREEEQLFFG 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05395 573 SUPERFAMILY MFS general substrate transporter 4 207 IPR036259 -
Tsu02g05395 573 SUPERFAMILY MFS general substrate transporter 231 521 IPR036259 -
Tsu02g05395 573 CDD MFS_Mch1p_like 7 512 - -
Tsu02g05395 573 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 4 514 - -
Tsu02g05395 573 Pfam Major Facilitator Superfamily 333 527 IPR011701 GO:0022857|GO:0055085
Tsu02g05395 573 ProSiteProfiles Major facilitator superfamily (MFS) profile. 328 573 IPR020846 GO:0022857
Tsu02g05395 573 PANTHER F25A4.25 PROTEIN 4 514 - -
Tsu02g05395 573 Pfam Nodulin-like 7 68 IPR010658 -
Tsu02g05395 573 Pfam Nodulin-like 90 269 IPR010658 -
Tsu02g05395 573 Gene3D MFS general substrate transporter like domains 328 555 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05395 Tsu-Chr2 62472683 62479386 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05395 1 514 Nodulin-like Gene Family AT1G74780 55.405 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05395 - - gmx:100775628 822.387