Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05394 ATGAATTGGTTAACAAATCGTTGGACCGGTGTCGCCGCCGCAATATGGATCCAATGGAGTTGCGGTTCATCATACACTTTCAGTATCTACTCACCTCTTCTCAAATCCACACAAAACTATTCCCAATCAACGCTTGATACCGTTTCCGTTTTCAAAGACATCGGAGCTAACTTCGGTGTTCTCTCCGGTCTTCTTTACTCCGCCGTCACACCTTATGGTGATCGGCAAATACCGTCTAAATGGAGTTGTTCATTTGGTGGGCCTTGGATTGTTGTGGCTGCTGGTGCTGTTCAGTGTTTTGTGGGCTTTTTGTTTATTTGGGCTTCTGTTGTGGGCTTGATTCATCAGCCACCTGTTGCTGTTATGTGCTTTTTCGCTTGGCTTGCTGCTAATGGACAAACGTTCTTGAATACTACAAATGTTGTTACTGGTTTGCGTAATTTTCCTCAATATAGTGGAACTATCATTGGTATCATGAAGGGTTTTCTTGGGCTTAGTGGAGCTATCTTGATTCAACTGTATCATACATTTTTTGATGGTGACCCAGCCACCTTCCTTCTGATGCTAGCTTGCTTACCTGCAATCATCTCTGTGTTGTTTATGTTTCTGTTGAGAATCTATCAAGTGCAAGACTATGATTACAAGAAGCATTTGGATGATTTCTCCGTGGTCACTGTTATTATTGTTGTGTATCTCATGTTCATAATaattttgcagaatttcgtgAGCTTACCATATTGGTCACGGGTTTTTACATTTGTGGTCCTTATGGTTCTATTGGCATTGCCTTTTGGGATTGCTGTAAAAGCTCATTGGGAGGATTCAAGGATATTTTCACAAGCTCACTCCATTGAGACTGCTGCCCCTACAATAGAATACCATGAGCTGCCTAGAGAGGAGGTGCAAGTGAATAATACTTTAGATGACGTGTTGCCCCTTGAACAAGAAAAGAACCTAGTACAAGCTATATGTACTGTTGAGTTTTGGATGTTGTTTGTGACCATGATATCCGGTTTGGGTTCTGGGCTGGcaacaataaataatatgagCCAAATAGGACAATCTCTTGGGTATAGTACTATTGAGATTAGCAATATGGTGTCATTGTGGAGTATGTGGAATTTTCTCGGCCGTTTTGGTGGCGGCCATGTATCCGATTATATCATGCATAAAAGAGGTTGGCCGAGGCCCCTGTTAATGACTGTAACTCTGGGGATTATGATTCTTGGTCATTTAATCATAGCTTCTGGTTTCCCTGGAAATTTTTATTTGGGTCCTGTCCTGGTGGGAATATGCTACGGTACACACTGGTCCTTAATGCCAACAATTACTTCTGAGATATTTGGTGTGAAGCACATGGGTACCATTTTCAACACTATTGCTGCATCAAGTCCACTTGGGTCATATATACTTTCTGTGAGAGTTGTTGGATATATATATGACAAGGAAGCCAATAAAGAAGATAATTCATGCTTCGGCATCCACTGTTTCATGTTGTCGTTTCTAATCCTGGCCGGTTTGGCTTTTCTGGCATTTTTGGTTGGTCTGGCGTTGTATTTCCGGACCCAAAGGTTCTATAAGCAAGTTGTGCTTAGAAAATTAAACTATTATGCGCGATGA 1620 0.4086 MNWLTNRWTGVAAAIWIQWSCGSSYTFSIYSPLLKSTQNYSQSTLDTVSVFKDIGANFGVLSGLLYSAVTPYGDRQIPSKWSCSFGGPWIVVAAGAVQCFVGFLFIWASVVGLIHQPPVAVMCFFAWLAANGQTFLNTTNVVTGLRNFPQYSGTIIGIMKGFLGLSGAILIQLYHTFFDGDPATFLLMLACLPAIISVLFMFLLRIYQVQDYDYKKHLDDFSVVTVIIVVYLMFIIILQNFVSLPYWSRVFTFVVLMVLLALPFGIAVKAHWEDSRIFSQAHSIETAAPTIEYHELPREEVQVNNTLDDVLPLEQEKNLVQAICTVEFWMLFVTMISGLGSGLATINNMSQIGQSLGYSTIEISNMVSLWSMWNFLGRFGGGHVSDYIMHKRGWPRPLLMTVTLGIMILGHLIIASGFPGNFYLGPVLVGICYGTHWSLMPTITSEIFGVKHMGTIFNTIAASSPLGSYILSVRVVGYIYDKEANKEDNSCFGIHCFMLSFLILAGLAFLAFLVGLALYFRTQRFYKQVVLRKLNYYAR 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05394 539 Pfam Major Facilitator Superfamily 331 524 IPR011701 GO:0022857|GO:0055085
Tsu02g05394 539 Pfam Nodulin-like 7 267 IPR010658 -
Tsu02g05394 539 SUPERFAMILY MFS general substrate transporter 4 206 IPR036259 -
Tsu02g05394 539 CDD MFS_Mch1p_like 7 511 - -
Tsu02g05394 539 PANTHER F25A4.25 PROTEIN 3 535 - -
Tsu02g05394 539 Gene3D MFS general substrate transporter like domains 314 533 IPR036259 -
Tsu02g05394 539 ProSiteProfiles Major facilitator superfamily (MFS) profile. 326 539 IPR020846 GO:0022857
Tsu02g05394 539 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 535 - -
Tsu02g05394 539 SUPERFAMILY MFS general substrate transporter 243 524 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05394 Tsu-Chr2 62469795 62472437 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05394 1 536 Nodulin-like Gene Family AT1G74780 55.064 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05394 - - gmx:100775628 886.33