Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05387 ATGAGTCGAGAACAACTGAAGCGAGGGAAGCATGAAAAAGTTTGTGATGGTGGTAAGAAGGTTATTGTTGCTGTCAAGGCATCAAAAGAAGTTCCAAAGACTGCTCTTGTCTGGTCTCTAACTCATGTTGTTCAACCTGGTGATTGCATTACACTTCTAGTGGTTGTACCTTCACAAAGTTCAGGCCGAAAATTATGGGGTTTTCCGAGGTTTGCTGGTGACTGTGCTAATGGACACAAGAAGTCGATGACAGTGGGAGCTAGTTCAGAGCACAAGAATGATATCACTGATTCTTGCTCTCAAATGATCCTTCAGCTCCATGATGTCTATGATCCAAATAAGATAAATGTCAGGATTAAAATTGTTTCTGGATCACCTTGTGGAGCAGTGGCCGCAGAAGCCAAGAAAGCTCAAGCCAATTGGGTCGTCTTTGATAAACATCTCAAGCATGAAGAAAAACAATGCATGGAAGAGCTTCAGTGTAACATTGCGGGTATGAAGGGTTCCCAACCGAAGGTACTCCGCTTCAATTTGGTAGGATCGCAAAAGAAGGATCTTGAAGATACCTGTTCATTACCTTCTGAGCAGCATGAGATGACTGGAAAACAATCCAAGAAGAATGGTTCTTTGAAATCTACAATAGGACAAGTTGTCACGCCAACTAGCAGCCCCGAGTTAGAGACATCATTTACTGCAACTGAAGTTGGAACTTCATCGGTTTCAAGCTCCGATCCTGGAACTTCACCATTTTTTGTCTCCGAGATCATTGCCGAGTCAAAGAAAGAGGAAACTATCATAGAAAATCAAGAAACTGATGATACTATCTCTGACACAGACAGTGAGAATTTGTCCACTTCTTCAGCAAGCTTGCGATTTCAGCCATGGGTTACAGATCTATTTTTGCATAAACAATCATCTCAACGTGAAGAAGAAAGGTCAGAGAGTTCTCGTTCTCATGATAGGTTTGAAACGTCTACAACTAGAGCTTTGCTGGAAAAGTTCTCCATGCTTGACAGAGAAGCTGAAATTGAAACCTCGGCCTTTAAGACTGACTGTGAATTCAGTGGAAGCATAAGAGAAGTGGTAGCATTATCTAGAAATGCCGCACCTGGTCCACCTCCATTATGTTCAATATGTCAACACAAGGCTCCAGTTTTTGGAAAACCTCCAAGATGGTTCAGCTATGCTGAGTTGGAGCTAGCTACTTGTGGATTTTCACCGGCCAATTTCTTGGCAGAAGGAGGATATGGATCTGTTCACAGAGGAGTTCTACCAGAAGGGCAGGTCATTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAGGGTGATCTTGAATTCTGCTCGGAGGTTGAAGTCCTGAGTTGTGCTCAGCACCGAAATGTTGTTATGTTGATCGGGTTCTGTATAGAGGATAAGAGAAGGTTATTGGTTTATGAATACATATGCAATGGATCATTGGATACTCATCTATATGGGAGACAACGGAAACCATTAGAATGGTCTGCGCGTCATAAAATTGCTGTTGGTGCTGCTCGAGGTTTGCGATATCTTCATGAAGAGTGCAGAGTGGGATGCATCGTCCACCGTGACATGCGGCCTAACAACATTCTTATCACTCATGATTTTGAACCACTGGTCGGTGATTTTGGACTGGCAAGGTGGCAGCCTGATGGAGACACTGGAGTGGAAACTAGAGTTATTGGCACATTTGGGTATTTGGCTCCCGAATATGCTCAAAGTGGACAAATAACTGAAAAGGCTGATGTTTATTCTTTCGGAGTGGTATTAGTGGAGCTTGTGACAGGTCGTAAAGCTGTGGATATCAACCGGCCCAAGGGACAGCAGTGTCTTACCGAGTGGGCACGACCACTATTAGAAGAGTATGCCATTGAGGAACTGATTGATCCAAGGTTGGGAAGTCACTACTCAGAACATGAGGTCACTTGCATGCTACATGCAGCATCCTTATGCATAAGGCGCGATCCTTATTCTAGACCACGCATGTCACAGGTTTTGCGAATACTAGAGGGCGACACAGTCATGGAATCACCACGCCATTTCGGAGGTTCCCCTTCCCTTTGA 2082 0.44 MSREQLKRGKHEKVCDGGKKVIVAVKASKEVPKTALVWSLTHVVQPGDCITLLVVVPSQSSGRKLWGFPRFAGDCANGHKKSMTVGASSEHKNDITDSCSQMILQLHDVYDPNKINVRIKIVSGSPCGAVAAEAKKAQANWVVFDKHLKHEEKQCMEELQCNIAGMKGSQPKVLRFNLVGSQKKDLEDTCSLPSEQHEMTGKQSKKNGSLKSTIGQVVTPTSSPELETSFTATEVGTSSVSSSDPGTSPFFVSEIIAESKKEETIIENQETDDTISDTDSENLSTSSASLRFQPWVTDLFLHKQSSQREEERSESSRSHDRFETSTTRALLEKFSMLDREAEIETSAFKTDCEFSGSIREVVALSRNAAPGPPPLCSICQHKAPVFGKPPRWFSYAELELATCGFSPANFLAEGGYGSVHRGVLPEGQVIAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDTHLYGRQRKPLEWSARHKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDINRPKGQQCLTEWARPLLEEYAIEELIDPRLGSHYSEHEVTCMLHAASLCIRRDPYSRPRMSQVLRILEGDTVMESPRHFGGSPSL 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05387 693 ProSitePatterns Tyrosine protein kinases specific active-site signature. 526 538 IPR008266 GO:0004672|GO:0006468
Tsu02g05387 693 MobiDBLite consensus disorder prediction 192 249 - -
Tsu02g05387 693 Gene3D HUPs 6 156 IPR014729 -
Tsu02g05387 693 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 16 683 - -
Tsu02g05387 693 MobiDBLite consensus disorder prediction 205 249 - -
Tsu02g05387 693 Gene3D Phosphorylase Kinase; domain 1 377 480 - -
Tsu02g05387 693 Pfam Protein tyrosine and serine/threonine kinase 411 674 IPR001245 GO:0004672|GO:0006468
Tsu02g05387 693 ProSiteProfiles Protein kinase domain profile. 405 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g05387 693 Gene3D Transferase(Phosphotransferase) domain 1 481 686 - -
Tsu02g05387 693 CDD USP_Like 20 143 - -
Tsu02g05387 693 SUPERFAMILY Protein kinase-like (PK-like) 389 677 IPR011009 -
Tsu02g05387 693 CDD STKc_IRAK 411 677 - -
Tsu02g05387 693 PANTHER OS01G0253100 PROTEIN 16 683 IPR045271 GO:0004714|GO:0006468
Tsu02g05387 693 MobiDBLite consensus disorder prediction 303 324 - -
Tsu02g05387 693 MobiDBLite consensus disorder prediction 261 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05387 Tsu-Chr2 62418340 62423344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05387 385 678 Trihelix Transcription Factor Family AT1G70460 52.824 9.67e-99 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Tsu02g05387 PK_Tyr_Ser-Thr 2.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05387 - - gmx:100789216 1167.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05387 02 62418340 62423344 Tsu02g05387 02 62418340 62423344 ECH
Tsu02g05387 02 62418340 62423344 Tsu08g00460 08 4597279 4603298 PCT