Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05374 ATGCAAGAAGAGAATATCGCTCACGAAGAACCTAAGATTGGGATGACATTTAGTTCCGAAGAAGAAGTTACTAGATATTACAAGAACTATGCTCGATGTATGGGTTTTGGAATTagtaaaatcaattcaaaaaagGCAGATGATGGAAAAAAATACTTTACTCTAGCATGTAGTCGGGCAAGAAAGCATGTGAGCAATTCAAAGAATCTTTTCAAGCCAAATCCCACCACAAGAACACAATGTAAGGCTAGAGTAAGTGTGGCTGTGTCTTTAGATGGAACAAATACAGTTTCAAGAGTTGCACTTGAGCATAATCATGAATTAAGCCCAACCAAATCAAGATATTTTAGATGCAACAAAAATTTGGACCCTCATATCAAAAGGAGGCTAGAGCTTAATGATAAAGCTGGAATTAATGTAAGCAGGAATTTTCGGTCCATGGTTGTGGAAGCGAATGGGTATGATAATCTTACATTTGGGGAAAAAGATTGTAGAAATTATATCGACAAAGTAAGGCGGCTTCGACTTGGGACAGGTGATGCTGATGCTATTCAAAACTATTTTGATAGAatgcaaagaaaaaacaatcaattttattatgttATGGATGTGGATGACGAAAGTCACTTACGAAATGTATTCTGGGCAGATGCCAGATCTAGGACTGCTTATGAGTATTTTGGTGAAGTTATAACTTTTGACACCACTTATTTAACGAATAAGTACGACATGCCTTTTGCTCCTTTTGTTGGAGTAAATCACCATGGTCAATCAGTGTTGTTAGGTTGCGCTCTATTGTCGAATGAGGATACTAAAACCTTTTCTTGGTTGTTCACAACTTGGTTAAAGTGTATGCATGGACGTGCACCAAATGCTATAATTACTGACCAAGATAGAGCAATGAAGAATGCAATTGAGGTCGTCTTTCCGAAAGCTCATCATCGGTGGTGCTTGTGGCATATAATGAAAAAGGTTCCGGAAAAATTGGGTAGACACTCCAATTATGAGTCTATCAAAACACTTTTGCATGATGCTGTATATGATTCGTCGAGCATAAGTGATTTCATGGAGAAGTGGGGGAATATGATTGCACGTTATGAGCTGCATGATAACGAATGGTTGAAAGGGTTGTTTGATGAACGACATCGTTGGGTTCCTGTGTATGTTAGAGATACATTTTGGGCTGGAATGTCAACTACACAAAGAAGTGAAAGTATGAATTCATTCTTCGACGGGTATGTGAACTCAAAGACAACATTAAAGCAATTTGTTGAGCAATATGACAATGCACtgaaagataaaattgaaaaagaaagcaaggctgattttaattcatttaatacaacaattGCTTGTATAAGTCGTTTTGGCTTTGAGTCCCAATTCCAAAAGGCATTCACAaatgaaaaattcaaagaatttcaAACAGAAATTTCTTCTTTGATGTACTGCAATGCTTTCGTTGAGAGAAATGATGGTTTGAATTCAATATTCTGGGTTATAGAGAGTAAAAGAGTATATGATAGAGATAAAGACATAAAGTTCAAGGTATTATTCAATGAGAAAGACTTCGAAATACAATGTGGATGTTGTCTATTTGAGTTTAAAGGAATTTTATGCAGACACATCCTTTGTGTTCTTCAGCTCACAGGTAAAACAGAGTCGGTGCCGTCTTGTTATATTTTGTCAAGGTGGAGGAAGGATATAAAGCGAAGACACACACTTATTAAATGTGGTTTTGATCATTTAGCTGGAAATATTGAATTGCAACGTGTTAGTAAAGCTTGTGATGCCTTTTACGATGTTGCTTCTACGGGGATACATACTGAAGATGATTTATTGAAAGTAATGAATTGGATCAAGGATTTGAAAATTGACTTAACTTGTAAAGAAAGCTCTCCTGTGATTATAGAAGAAGAGAGACTAGTTCAAGATGATGCGACTAAAATTCTTGATCCTATAGTAGCACAAAGAAAAGGACGGCCTCCCTCAAAGAGGAAGGATTCTAAAGTTGATCAAATTGtgaagaagaagcttgcaagaAAGAAGACTCAAAATAGCAGTAGAAAGAGTAACAGTGGTCAAACACAAGAAGAGGTGACCTTTAAAATTCTTAAGTTTCTTTTCAATAGTTAA 2136 0.3436 MQEENIAHEEPKIGMTFSSEEEVTRYYKNYARCMGFGISKINSKKADDGKKYFTLACSRARKHVSNSKNLFKPNPTTRTQCKARVSVAVSLDGTNTVSRVALEHNHELSPTKSRYFRCNKNLDPHIKRRLELNDKAGINVSRNFRSMVVEANGYDNLTFGEKDCRNYIDKVRRLRLGTGDADAIQNYFDRMQRKNNQFYYVMDVDDESHLRNVFWADARSRTAYEYFGEVITFDTTYLTNKYDMPFAPFVGVNHHGQSVLLGCALLSNEDTKTFSWLFTTWLKCMHGRAPNAIITDQDRAMKNAIEVVFPKAHHRWCLWHIMKKVPEKLGRHSNYESIKTLLHDAVYDSSSISDFMEKWGNMIARYELHDNEWLKGLFDERHRWVPVYVRDTFWAGMSTTQRSESMNSFFDGYVNSKTTLKQFVEQYDNALKDKIEKESKADFNSFNTTIACISRFGFESQFQKAFTNEKFKEFQTEISSLMYCNAFVERNDGLNSIFWVIESKRVYDRDKDIKFKVLFNEKDFEIQCGCCLFEFKGILCRHILCVLQLTGKTESVPSCYILSRWRKDIKRRHTLIKCGFDHLAGNIELQRVSKACDAFYDVASTGIHTEDDLLKVMNWIKDLKIDLTCKESSPVIIEEERLVQDDATKILDPIVAQRKGRPPSKRKDSKVDQIVKKKLARKKTQNSSRKSNSGQTQEEVTFKILKFLFNS 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05374 711 MobiDBLite consensus disorder prediction 678 697 - -
Tsu02g05374 711 ProSiteProfiles Zinc finger SWIM-type profile. 515 551 IPR007527 GO:0008270
Tsu02g05374 711 Pfam MULE transposase domain 230 324 IPR018289 -
Tsu02g05374 711 Pfam FAR1 DNA-binding domain 25 109 IPR004330 -
Tsu02g05374 711 Pfam SWIM zinc finger 521 548 IPR007527 GO:0008270
Tsu02g05374 711 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 8 607 IPR031052 GO:0006355
Tsu02g05374 711 PANTHER OS03G0843700 PROTEIN 8 607 - -
Tsu02g05374 711 SMART 26again6 526 553 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05374 Tsu-Chr2 62285244 62287379 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu02g05374 MULE 3.9e-37 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05374 - - cam:101506732 1035.02