Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05366 ATGGCAACCAACTTAGCAGAAAGGGTGCAATATCCCTTAGACTCATCCTCCTACAAGATCCTTGATGAGATTGGCGCCGGTAACAGCGCCATCGTCTACAAAGCAATCTGCATCCCCATAAACTCTACACCAGTAGCTATAAAATCGATAGACTTAGACCGTTCACGCCCTGATCTTGACGATGTTCGACGTGAAGCAAAGACATTATCACTTCTTTCTCACCCTAACATCCTCAAAGCTCACTGTTCCTTCACTGTCGATCGCCGTCTTTGGGTGGTTATGCCATTCATGGCAGGAGGTTCATTACAATCCATAATCTCTCACTCATTCCAAAACGGCTTAACAGAACAATCCATAGCTGTTATTCTCAAAGACACTCTCAATGCTCTTTCTTATCTTCATGGACAAGGTCATCTTCATAGAGATATCAAATCTGGTAACATTCTTGTTGATTCAAATGGATTGGTGAAACTTGCTGATTTTGGTGTATCTGCTTCCATTTATGAATCAAACAACTCAGTAGGAGCATGTTCTTCTtattcatcttcatcttctaattcttcttcttctcatatATTTACTGATTTTGCTGGAACACCTTATTGGATGGCTCCTGAAGTTATTCACTCTCATAATGGTTACAGTTTCAAAGCTGATATTTGGTCTTTTGGGATAACTTCCTTGGAATTAGCACATGGAAGACCACCACTTTCTCATCTTCCTCCTTCTAAATCAATGATGCTTAATATCACCAAGAGGTTTAGGTTTTCTGATTTTGATAAATATAGTTATAAAGGTCATGGTGGTGGTAGTAATAAATTTTCTAAGGCTTTTAAGGATATGGTTGCTTCTTGTTTGAATCAAGATCCTACAAAAAGACCTTCTGCTGAGAAGTTGCTTAAGCATCCTTTCTTTAAGAACTGTAAAGGACCAGAATTTTTGGTGAAGAATGTGTTGAATGGATTGCCTAGTGTTGAGAAAAGGTATAAAGAGATGAAAATTATGGATCCAGATTCAAAGTgtaatgatgatggtgatgatgatgaggacTCTGTGGTGAAACAAAGAAGAATTAGTGGTTGGAATTTCAATGAAGATGGATTGAAACTTGAACCAGTATTCCCAAAGGATCTAAGTAGAGATGATGAAGTTGTGAAACAAGTTcggtttgaagaagaaaaggtgaTCAAAGAGGATGATGTTGTTGCATCATCAGGAACTGTGATGGAGACAAACCCCAATGTGAATGCTTCTGATGTGGTTGATCATGAAAATGTTGGTGGTTTATTGAAGAACCGCGAAGCTACGTTGGGAACTCTGAATGTGTTGAAAGAAAGCTTGGAACAAGAGCTGGGACAAGTGAAGTTTCTGATAAATTTAATTGGTGGAAATGGAGAGGAGATTCATGTGGATGACAGTGAGGAGAAAATGGCGCCGGAGATCTCTAAGTTAAGGATAGAAGTAGAAAATGAGAGGAAGAAAAATCTGCAGTTGGAATTGCAGCTGGAGAATATCAAGCTTCACCTAATTTCCTCAGCTGTTAGTAGTCCTACAAGTTAA 1560 0.3686 MATNLAERVQYPLDSSSYKILDEIGAGNSAIVYKAICIPINSTPVAIKSIDLDRSRPDLDDVRREAKTLSLLSHPNILKAHCSFTVDRRLWVVMPFMAGGSLQSIISHSFQNGLTEQSIAVILKDTLNALSYLHGQGHLHRDIKSGNILVDSNGLVKLADFGVSASIYESNNSVGACSSYSSSSSNSSSSHIFTDFAGTPYWMAPEVIHSHNGYSFKADIWSFGITSLELAHGRPPLSHLPPSKSMMLNITKRFRFSDFDKYSYKGHGGGSNKFSKAFKDMVASCLNQDPTKRPSAEKLLKHPFFKNCKGPEFLVKNVLNGLPSVEKRYKEMKIMDPDSKCNDDGDDDEDSVVKQRRISGWNFNEDGLKLEPVFPKDLSRDDEVVKQVRFEEEKVIKEDDVVASSGTVMETNPNVNASDVVDHENVGGLLKNREATLGTLNVLKESLEQELGQVKFLINLIGGNGEEIHVDDSEEKMAPEISKLRIEVENERKKNLQLELQLENIKLHLISSAVSSPTS 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05366 519 Gene3D Phosphorylase Kinase; domain 1 6 96 - -
Tsu02g05366 519 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 6 510 - -
Tsu02g05366 519 ProSitePatterns Protein kinases ATP-binding region signature. 24 48 IPR017441 GO:0005524
Tsu02g05366 519 SMART serkin_6 18 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g05366 519 Pfam Protein kinase domain 18 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g05366 519 Coils Coil 481 508 - -
Tsu02g05366 519 PANTHER SERINE/THREONINE-PROTEIN KINASE BLUS1 6 510 - -
Tsu02g05366 519 SUPERFAMILY Protein kinase-like (PK-like) 15 312 IPR011009 -
Tsu02g05366 519 Gene3D Transferase(Phosphotransferase) domain 1 100 351 - -
Tsu02g05366 519 ProSiteProfiles Protein kinase domain profile. 18 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05366 Tsu-Chr2 62201976 62203692 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05366 1 497 MAP Kinase Kinase Kinase Kinase AT4G14480 55.422 3.22e-179 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Tsu02g05366 Pkinase 8.3e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05366 K08835 - gmx:100820227 644.81