Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05358 atggcattttcatcatcttcttctaatGTTCCTCCAATTAAATATGATGTATTCATTAGCTTTAGAGGCACATACATACGTCATGGTTTTCTAGGCCATTTGAGAAAGGAATTGAGGCAAAAGCAAGTTGATGCTTATGTGGATGATAGACTTGAAGGAGGAGAAGAAATAACACAAGCACTTGTCAAAGCTATTGAAGGATCACTTATTTCTTTGATAATATTTTCCAAGGACTATGCTTCTTCAAAGTGGTGTTTGGAAGAACTTGTCAAAATTATTGAATGTATGGTTAGAAATAAACAAATTGTGATCCCTATTTTCTATAATGTTAAACCAAAGGATGTAAGACACCAAAAAAGAACTTATGGTGATTCATTTGCTAACcatgaaaaaaataatggaaGCTTAGCTAAGGTGCAAAATTGGAGATCTGCTTTGACTATAGCTGCTAATCTTTCAGGATTTGATTCATCAAAATTTGGGGATGAAATTGAGCTTATAGAAGAAATTGTCAAAGATGTGTCATCCAAGTTGAATCTTATGTGCCAAAGTGAGTTAACAGATCTTGTTGGAATTGAACAAAGGATTGCAGATTTGGAATCACTGTTATGCCTAGATTCAACTGTAGATGTTCTTGTCATTGGCATTTGGGGTATGGGCGGTATTGGCAAGACAACTCTTGCAGCTGCAGTGTATAATCGTCTTTGTTTTGAATATGAAGGATGTTGCTTTATGGCAAACATAACAGAAGAATCAGAGAAGCATGGAATGATTTATCTGAAGAATAAAATTCTCTCTATATTGCTAAATGAAAATGATCTATATATCGGTACTCCTAATGGAGTTCCTCCTTATGTTAAAAGAAGGCTGGTTCGTAAAAAGgttcttcttgttcttgatGATATCAATGATTTCGAGCACCTAGAGAATTTAGTTGGAGGACTTGATTGGTTTGGATCTGGTAGCAGAATCATTGTAACAACCAGAGATAAGCAAGTGCTTGGTAAAGGAGTCAATTGTATATACGAGGCCAAGGCATTGGAGTCCGATGACGCTATTAAACTTTTCATCACAAATGCCTTCAAAAATGGTTGTCTTGACATGGAGTGGATTGAGCTATCAAGAAGGGTGATTCATTATGCTAATGGAAATCCATTAGTTTTGAAAGTTTTGGGTTCTTTTCTTTATGGTAAAACCAAAATAGAATGTGAAAGTCAATTGCAGAAACTTAAGAAAATGCCTCAtgcaaaaattcaaaatgtaTTGAGACTGAGTTATGATAGACTCGACcgagaagagaagaacatatttttatatgttgcGTGTCTTTTGAAAGGATATGAAGTTCTACAAATAACAGCTTTGCTTGATGCTTGTGGGTTCTCAACAATTATTGGGTTAAAAGTCCTTAAAGACAAGGCTCTTATAATTGAAGCCAAAGGCGCTGGAAAATCAATTGTACTAATGCATGACTTGATACAAGAAATGGGCTGGGAGATTGTTCGAGAAGAATGTATCGAAGACCCTGGAAAACGCAGTAGGTTATGGGATCCTAATGATGTTCATCAAGTATTGACAAATAACACGGGAACTAAAGCCATTAAAAGCATAACTCTGAATGTCTCGAAATTTGATGAGCTGAAGTTAAGTCCTCAAGTCTTCGGTAGGATGCAGCAGttaaaatttcttaaatttacCCAACATTATGGCGATGAGAAAATCCTGTATCTTCCTCAGGGTCTTGAATCTTTGCCAAATGACCTACTGCTTTTTCAATGGGTTAGTTATCCTTTGAAATCCCTACCTCAGACTTTCTGTGCAGAAAATCTTGTTGAGCTAAAATTGACTTCGAGCCGAGTGGAAAAACTTTGGGATGGAGTCCAGAATATTCAACATTTGAAGAAAATTGACCTCAGTTATTCCAAATATCTGCTAGAGCTCCCTGATTTTTCAAAGGCCTCAAATCTTGAAGAAATAGAACTCTATGGTTGCAAAAGTTTGCTTAATGTTCATCCTTCAATTTTACGTCTCAACAAGCTAGTGCGACTGAACCTATTTTACTGCAAAGCACTTACCAGTCTTCGAAGTGATACTCATTTAAGATCTCTTCGGGATCTCTTCCTCGGTGGTTGCTCAAAACTCAAGGAGTTTTCAGTGACATCTGAGAATATGAAAGACTTAACTTTAACTTCAACAGCTATCAATGAATTGCCCTCATCAATTGGTAGTCTCAAAAAACTCGAATCATTGAGTCTTGATTTCTGCAAAAGCCTAATCAACCTTCCAAATGAAATTACCGACCTGAGATCACTTCGAGCTCTTGACATTCATGGTTGCACACAACTTGATGCATCAAATCTTCATATCCTACTTAACGGTTTAACTTCTTTAGAAACGTTAAAGCTGGAAGGATGTCGTAACTTGTTTGAGATTCCAGACAACATCAGCTCACTATCATTACTGCGTGAGTTGTTACTGAAACAAACTGATATTGAGATATTTCCTGCAAGCATCAAGCATCTTTCTAAGCTGGAAAAGCTTGACATAAAGGGTTGCAGGAGGCTTCATTATCTTCCAGAGCTTCCGCCATCACTGAAAGAGTTTTATGCCACTAATTGTTCATCTTTAGAGACTGTGAtgttcaattggaatgttgctGATCTACTACAACTGCAAGCATATAAGTTGCGCACACGATTCGAAAATTGTGTTAACTTGGATGAACTTTCACTCAGGGCTATTGAAGTAAATGCTCAAGTAAACATGAAGAAATTGGTATATAAACATCTCTCAACATTAGGAAGCAAATTTCTTGATGGTCCAGTTGATGTGATCTATCCTGGAAGTAATGTTCCAGAGTGGTTCATGCACAGAACAACACAGGCTTCAGTGACTGTTGATTTCTCTTCCGCTCCAAATTCCAAGTTTGTTGGTTTCATATTCTGCGTCATTGCTGGTCAGCTCCCAGCGGACGATAAAAACTTCATTGGATGTGACTGTTACCTGGAAACTGGTAATGGCGAAAGGGTCGCTCTTGGAAACATGGATACATGGACTAGTATACATTCCCCCGAGTTTTTTTCCGACCATGTTTTTATATGGTATGATAAAATGTGTTGTCTGCAAAACAGTGAACCCGAAAAGGAAAACGTGGAAGAACTCATGGCCAGTTATAATCCAAAGGTTTTATTTGAATTCTTTGCTCAAAGTGGAAATACTTGGAAAAAGAGGGAGAATAGTATGATAAGAGGGTGTGGAGTTTGTCCAATATATGATAcagaatattttgatttcattaaACAAATGGAATTGGAATTCACATTGCAATCTATTGCTAATGAAAGGTCAGTTCAGTGCAGTGATAAGAAAGAAACACTAAACCCAAAACAACCATGCAAGAAATTCTTTTCACGCGTTCGAACTGGAATTTGGAAGAGTGCAACGCAGGGCTTGAAAGATATATTGTTGTGA 3471 0.3572 MAFSSSSSNVPPIKYDVFISFRGTYIRHGFLGHLRKELRQKQVDAYVDDRLEGGEEITQALVKAIEGSLISLIIFSKDYASSKWCLEELVKIIECMVRNKQIVIPIFYNVKPKDVRHQKRTYGDSFANHEKNNGSLAKVQNWRSALTIAANLSGFDSSKFGDEIELIEEIVKDVSSKLNLMCQSELTDLVGIEQRIADLESLLCLDSTVDVLVIGIWGMGGIGKTTLAAAVYNRLCFEYEGCCFMANITEESEKHGMIYLKNKILSILLNENDLYIGTPNGVPPYVKRRLVRKKVLLVLDDINDFEHLENLVGGLDWFGSGSRIIVTTRDKQVLGKGVNCIYEAKALESDDAIKLFITNAFKNGCLDMEWIELSRRVIHYANGNPLVLKVLGSFLYGKTKIECESQLQKLKKMPHAKIQNVLRLSYDRLDREEKNIFLYVACLLKGYEVLQITALLDACGFSTIIGLKVLKDKALIIEAKGAGKSIVLMHDLIQEMGWEIVREECIEDPGKRSRLWDPNDVHQVLTNNTGTKAIKSITLNVSKFDELKLSPQVFGRMQQLKFLKFTQHYGDEKILYLPQGLESLPNDLLLFQWVSYPLKSLPQTFCAENLVELKLTSSRVEKLWDGVQNIQHLKKIDLSYSKYLLELPDFSKASNLEEIELYGCKSLLNVHPSILRLNKLVRLNLFYCKALTSLRSDTHLRSLRDLFLGGCSKLKEFSVTSENMKDLTLTSTAINELPSSIGSLKKLESLSLDFCKSLINLPNEITDLRSLRALDIHGCTQLDASNLHILLNGLTSLETLKLEGCRNLFEIPDNISSLSLLRELLLKQTDIEIFPASIKHLSKLEKLDIKGCRRLHYLPELPPSLKEFYATNCSSLETVMFNWNVADLLQLQAYKLRTRFENCVNLDELSLRAIEVNAQVNMKKLVYKHLSTLGSKFLDGPVDVIYPGSNVPEWFMHRTTQASVTVDFSSAPNSKFVGFIFCVIAGQLPADDKNFIGCDCYLETGNGERVALGNMDTWTSIHSPEFFSDHVFIWYDKMCCLQNSEPEKENVEELMASYNPKVLFEFFAQSGNTWKKRENSMIRGCGVCPIYDTEYFDFIKQMELEFTLQSIANERSVQCSDKKETLNPKQPCKKFFSRVRTGIWKSATQGLKDILL 1156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05358 1156 Pfam C-JID domain 946 1094 IPR045344 -
Tsu02g05358 1156 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 439 IPR027417 -
Tsu02g05358 1156 ProSiteProfiles TIR domain profile. 13 178 IPR000157 GO:0007165
Tsu02g05358 1156 Gene3D - 13 179 IPR035897 -
Tsu02g05358 1156 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 155 IPR035897 -
Tsu02g05358 1156 Pfam NB-ARC domain 200 415 IPR002182 GO:0043531
Tsu02g05358 1156 Pfam TIR domain 14 191 IPR000157 GO:0007165
Tsu02g05358 1156 PRINTS Disease resistance protein signature 213 228 - -
Tsu02g05358 1156 PRINTS Disease resistance protein signature 289 303 - -
Tsu02g05358 1156 PRINTS Disease resistance protein signature 381 395 - -
Tsu02g05358 1156 PRINTS Disease resistance protein signature 839 855 - -
Tsu02g05358 1156 SMART till_3 14 152 IPR000157 GO:0007165
Tsu02g05358 1156 SUPERFAMILY L domain-like 489 912 - -
Tsu02g05358 1156 Pfam Leucine Rich Repeat 609 628 IPR011713 -
Tsu02g05358 1156 Gene3D - 346 430 IPR042197 -
Tsu02g05358 1156 Gene3D - 180 339 IPR027417 -
Tsu02g05358 1156 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 779 IPR044974 GO:0006952
Tsu02g05358 1156 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 744 1105 IPR044974 GO:0006952
Tsu02g05358 1156 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 10 779 - -
Tsu02g05358 1156 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 744 1105 - -
Tsu02g05358 1156 Gene3D Ribonuclease Inhibitor 723 928 IPR032675 -
Tsu02g05358 1156 Gene3D Ribonuclease Inhibitor 517 722 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05358 Tsu-Chr2 62143266 62148646 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05358 3 854 WRKY Transcription Factor Family AT4G12020 34.642 1.49e-123 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05358 - - ccaj:109805840 1782.69