Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05352 ATGGGTGCTTCTGGAAAATGGTTTAAATCACTTCTTTCTCATAAAAAAACTTCATCAACAACTGATCaaGAGAAGAAGTTTAATGGTGATAACAAGATTAGTACTAAGAAAAAATGGAAGCTATGGAAGACATCTTCAGAAGggtcttcttcttcaacctcttgtATGAACAAGAGTGGTGCTGCTGTGTATGATTCTTCTATTACTGCTACTGCTGCTGCTGTCGCTGTTGTTGTTCGAGCTCCGCCTAAAGATTTCATCGTCATTAGACAGGAATGGGCTGCTATTCGTATTCAGGCCGTGTTTCGAGCTTTCTTGGCAAGAAGAGCTTTGAGGGCATTGAGGGCAGTGGTGAGACTGCAAGCTATATTTAGAGGCAGACAAGTGAGAAAACAAGCAGCTGTGACTCTAAAGTGCATGCAAGCTCTTGTTAGAGTTCAGGCACGCGTAAGGGCTAGGAATGTCAGGAATTCTCCAGAAGGTAAAGCAGTGCAGCAGCTAATCGACGACCATCGCAACCAAGCTGATTCTGTCAAACTTATAGAGCAAGGATGGTGTGAAATTCCTGGAACTGCAGATGAAGTTAAAACAAAGCTAAGAATGAGGCAAGAAGGAGCCATCAAGAGAGATAGAGCAATGGCATACTCTCTATCCGCACAGCAGTCAAGAATCAGTGCTAGTCCAAACTCAAAAGCCACAACAAAATCAATGACTCTTTTCAAGCATCATCACAACCTTGACAATAACAAGAGCTTAGGAAATAGCTTGTTAGAACGCTGGATGTCGACCAAACCATGTCCATGGGAGAGTCCAATCTCAAGTAGGAAGAGTGAAGAACTTATTCCTAATTTTCAATCAAGAAGGAATGGTGTAACAACTAGGATTTCAGCTCTTAAAATCTGTCAGCAAACTCCATCATCTTCGACAATAAGCTCTGAATACATGAATGATGATAGCCTTATATCAACTTCATGTACATCTGAATCTCCATCTATGCCATTCACCAATACTGTTATGGTGGAAACAAGTGAGGAAAAAGATGTTCATTTACCTAGCTACATGAATTTAACAGAATCAACTAAGGCTAAACATAAAGGTTATAGGTCTACTTCGCAGAATTCAAAGAGACTCGCAATGGATGATTGTATGTCTCATAACACAAGTTCAACTTTTCTGAATGGATATAATAGTATAAGCAGTTCAGGTTCTGACCCTTCGGTTAATCCATGGAAGGATCGTTGCTCAACGCCACTAAGGGCAAGCTATTATCAAAAACGATACGCCAGAAGATAG 1293 0.3991 MGASGKWFKSLLSHKKTSSTTDQEKKFNGDNKISTKKKWKLWKTSSEGSSSSTSCMNKSGAAVYDSSITATAAAVAVVVRAPPKDFIVIRQEWAAIRIQAVFRAFLARRALRALRAVVRLQAIFRGRQVRKQAAVTLKCMQALVRVQARVRARNVRNSPEGKAVQQLIDDHRNQADSVKLIEQGWCEIPGTADEVKTKLRMRQEGAIKRDRAMAYSLSAQQSRISASPNSKATTKSMTLFKHHHNLDNNKSLGNSLLERWMSTKPCPWESPISSRKSEELIPNFQSRRNGVTTRISALKICQQTPSSSTISSEYMNDDSLISTSCTSESPSMPFTNTVMVETSEEKDVHLPSYMNLTESTKAKHKGYRSTSQNSKRLAMDDCMSHNTSSTFLNGYNSISSSGSDPSVNPWKDRCSTPLRASYYQKRYARR 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05352 430 ProSiteProfiles IQ motif profile. 115 142 IPR000048 GO:0005515
Tsu02g05352 430 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 428 - -
Tsu02g05352 430 SMART iq_5 90 112 IPR000048 GO:0005515
Tsu02g05352 430 SMART iq_5 113 134 IPR000048 GO:0005515
Tsu02g05352 430 PANTHER IQ-DOMAIN 5-RELATED 1 428 - -
Tsu02g05352 430 ProSiteProfiles IQ motif profile. 91 119 IPR000048 GO:0005515
Tsu02g05352 430 Gene3D - 89 140 - -
Tsu02g05352 430 Pfam IQ calmodulin-binding motif 93 112 IPR000048 GO:0005515
Tsu02g05352 430 Pfam IQ calmodulin-binding motif 115 132 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05352 Tsu-Chr2 62110859 62113634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05352 1 412 IQD Protein Family AT1G72670 42.299 1.93e-88 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05352 - - mtr:MTR_2g099780 602.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05352 02 62110859 62113634 Tsu08g00508 08 5283492 5286313 PCT