Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05325 ATGGAAGCAGATGTTATTGCTAATGGAGTGCACACATTTTTCGACAAAGCTGCTCACCTTGTGGACAGCACAAACCAAGTTGGTCATTTTCAGAAATTACCAATTGTTAAAACAATTCATCTGAGGGATTCTTTGTCGTCGAAAGAGATTCTCTGGTTAAAGCAAACTGGTCAACACTCAAAGCGCATCACACTCAAGGAGACGAGCATTAACAGGAATGGTATCTCCGACAAAGAATTTCGGCACTCAAATGAAGTATTGTCTGGTTCAACCGTTAAGAAGGGTAAGATCGGAGCAGATGTTATTGCTACTGGAGTGCACACATTTTTCGGCAAAGCTGCTCACATTGTGGACAGCACAAACCAAGTTGGTCGCTTTCAGAAATTACCTATTGTTGTTAGGACTTTCTGA 411 0.4161 MEADVIANGVHTFFDKAAHLVDSTNQVGHFQKLPIVKTIHLRDSLSSKEILWLKQTGQHSKRITLKETSINRNGISDKEFRHSNEVLSGSTVKKGKIGADVIATGVHTFFGKAAHIVDSTNQVGRFQKLPIVVRTF 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05325 136 PANTHER CALCIUM-TRANSPORTING ATPASE 1 33 - -
Tsu02g05325 136 PANTHER PLASMA MEMBRANE ATPASE 83 130 - -
Tsu02g05325 136 PANTHER PLASMA MEMBRANE ATPASE 1 33 - -
Tsu02g05325 136 PANTHER CALCIUM-TRANSPORTING ATPASE 83 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05325 Tsu-Chr2 61898706 61899677 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05325 1 33 Primary Pumps ATPases AT4G30190 84.848 2.03e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05325 K01535 - gmx:100791692 80.8777