Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05312 ATGGAAAAGGACAAATCTTTGGGTCTCGGGGGTGGTTTTCCACCTCCATCAGGACGTTATTCGGGTTATTCACTTCCTGGAAGTGGTTTCAATGTGAAATCTGAATCCTCATCCGCGGCGTATCCACCGCCTGTTCCTGGAACCAGCTCAGATTGTAGTGGCTTTAGTCATGATATTAGCAGAATGTCTGATAATCCTCCAAGAAATAGAGGTCATAGGCGTGCTCACTCCGAGATTCTTACCTTGCCTGATGATATTAGTTTCGATAGTGACCTCGGTGTAGTTGGTGGTGCTGATGGACCTTCATTCTCTGATGATACTGAGGAGGACTTGCTGTCTATGTATCTTGATATGGATAAGTTCAACTCATCGTCTGCAACGTCCACATTTCAAATGGGTGAGGGGTCTAATGCTGCGGCAGCATCAGGTTCCACGCCAATGTCGATAGGGAAGGCATCAGGAGCAGGTACCTCTTCTGGGGAAAATATTTCCGGTGGTACTACTAATGAAAGGCCCAGAATTAGACACCAGCACAGCCAATCTATGGATGGGTCGACAACCATCAAACCTGAGATGTTAGTTTCGGGTTCAGATGACATGTCTGCAGCTGATTCCAAAAAAGCAATGTCAGCAGCCAAGCTTGCAGAACTTGCCTTGATTGATCCCAAGCGTGCAAAAAGGATATGGGCAAATAGGCAGTCTGCGGCAAGGTCAAAAGAGAGGAAGATGCGCTATATTGCTGAGCTTGAAAGGAAAGTGCAGACATTGCAAACAGAGGCAACATCTTTGTCTGCACAATTAACTCTCTTGCAGAGAGATACAACCGGACTGAATTCTGAGAACAGTGAGCTGAAGCTGCGATTGCAAACCATGGAGCAACAAGTTCACTTGCAGGATGCTTTAAATGATGCattaaaagaagaaattcaGCATTTGAAAGTATTGACTGGGCAAGCTATACCACCAAATGGAGGACCTATGATGAACTTTGCTTCTTTTGGAGGGGGACAGCAGTTCTATCCCAATAATAATCATGCCATGCACACTCTTTTAGCTGCACAACAGTTTCAACATCTCCAAATTCATCCTCAgaagcagcagcagcagcatcCGTTTCAGCAACAAATACAACAGCATcagcaacagcaacaacaaataCAGCAGCAACAaatgcagcagcagcagcagcagcaggaacaacagcaacaacaacaatcagGCGACTTGAAAATGAGAGCAACCACACCTCCATGCCCTAATGATAATCCTTCATCAGATGCAAATCCTTCGGCCGCCAAGGATTGTTGA 1308 0.419 MEKDKSLGLGGGFPPPSGRYSGYSLPGSGFNVKSESSSAAYPPPVPGTSSDCSGFSHDISRMSDNPPRNRGHRRAHSEILTLPDDISFDSDLGVVGGADGPSFSDDTEEDLLSMYLDMDKFNSSSATSTFQMGEGSNAAAASGSTPMSIGKASGAGTSSGENISGGTTNERPRIRHQHSQSMDGSTTIKPEMLVSGSDDMSAADSKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTTGLNSENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKVLTGQAIPPNGGPMMNFASFGGGQQFYPNNNHAMHTLLAAQQFQHLQIHPQKQQQQHPFQQQIQQHQQQQQQIQQQQMQQQQQQQEQQQQQQSGDLKMRATTPPCPNDNPSSDANPSAAKDC 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05312 435 MobiDBLite consensus disorder prediction 385 435 - -
Tsu02g05312 435 MobiDBLite consensus disorder prediction 27 62 - -
Tsu02g05312 435 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 9 383 - -
Tsu02g05312 435 MobiDBLite consensus disorder prediction 1 75 - -
Tsu02g05312 435 Coils Coil 372 406 - -
Tsu02g05312 435 CDD bZIP_plant_RF2 224 273 IPR044759 GO:0003700|GO:0006355
Tsu02g05312 435 MobiDBLite consensus disorder prediction 136 170 - -
Tsu02g05312 435 SUPERFAMILY Leucine zipper domain 223 275 IPR046347 GO:0003700|GO:0006355
Tsu02g05312 435 SMART brlzneu 219 283 IPR004827 GO:0003700|GO:0006355
Tsu02g05312 435 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 221 284 IPR004827 GO:0003700|GO:0006355
Tsu02g05312 435 Gene3D - 222 285 - -
Tsu02g05312 435 Coils Coil 239 308 - -
Tsu02g05312 435 MobiDBLite consensus disorder prediction 136 188 - -
Tsu02g05312 435 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 9 383 - -
Tsu02g05312 435 Pfam bZIP transcription factor 223 281 IPR004827 GO:0003700|GO:0006355
Tsu02g05312 435 MobiDBLite consensus disorder prediction 385 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05312 Tsu-Chr2 61791263 61795135 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05312 19 353 bZIP Transcription Factor Family AT1G06070 73.294 3.37e-166 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu02g05312 bZIP_1 3.9e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05312 - - gmx:100786738 575.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05312 02 61791263 61795135 Tsu02g05312 02 61791263 61795135 ECH