Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05303 aTGGAGTTTGAGATTGATGATAACAGCAATGACGAGCCAGTTGGAAATGCTACTATGGGAGAGGTTAGTAGCAGCATAGCTGACAAAGACATAGTCGACTGTAGTTCTTTGGTTCCAATTGATGAACAGGATCAAGATGATAATATGACTCAAGATTCTTCTGGAGGGGACCAAATACTATCAGCAGTTCCTCCATTATCGGTTGTGAGAAGAATTGAAGAACCCTATATGGGTCAGGAGTTTGTATCGGAAGCCGAAGCCCATGCATTTTATAATGCATATGCTACGCGTGTTGGATTTGTAATACGTGTAAGTAAGCTCTCAAGGTCAAGGCGTGATGGATCTGTTATTGGACGGGCTCTTGTTTGCAACAAAGAAGGTTTCAGAATGCCTGACAAGCGGGAAAAGATTGTAAGGCAAAGGGCAGAAACAAGGGTTGGTTGCAGGGCAATGATAATGGTGAGGAAATTAAATTCTGGTTTGTGGTCTATAACAAAGTTTGTAAAGGAGCACACACATCCTCTGACACCTGGAAGAGGCAGACGTGACTTCGTTTATGAGCAATATCCGAGTGGACATGACAGAGTTCGAGAATTATCTCAGCAGTTGGCCCTAGAGAAAAATCGAACTGAAACCTATAAAAGGAATCTTGAATTGTTATACGAGTACATCGAAGAGCATAATGAAACTGTTTCAAAGCAGATACAGCAAATAGTAGAGAGTGTGAAGGAGATTGAAGCCAAAGAACAAGAGAATCCTAGATAG 765 0.4157 MEFEIDDNSNDEPVGNATMGEVSSSIADKDIVDCSSLVPIDEQDQDDNMTQDSSGGDQILSAVPPLSVVRRIEEPYMGQEFVSEAEAHAFYNAYATRVGFVIRVSKLSRSRRDGSVIGRALVCNKEGFRMPDKREKIVRQRAETRVGCRAMIMVRKLNSGLWSITKFVKEHTHPLTPGRGRRDFVYEQYPSGHDRVRELSQQLALEKNRTETYKRNLELLYEYIEEHNETVSKQIQQIVESVKEIEAKEQENPR 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05303 254 MobiDBLite consensus disorder prediction 41 59 - -
Tsu02g05303 254 Coils Coil 196 216 - -
Tsu02g05303 254 Coils Coil 228 248 - -
Tsu02g05303 254 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 1 252 - -
Tsu02g05303 254 MobiDBLite consensus disorder prediction 1 59 - -
Tsu02g05303 254 Pfam FAR1 DNA-binding domain 90 176 IPR004330 -
Tsu02g05303 254 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05303 Tsu-Chr2 61743848 61747276 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu02g05303 FAR1 2e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05303 - - gmx:100806900 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05303 02 61743848 61747276 Tsu02g05303 02 61743848 61747276 ECH
Tsu02g05303 02 61743848 61747276 Tsu02g02249 02 22529128 22530572 PCT