Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05302 ATGGGGTTCTCAAAAAAACAATTCTTAACCTACCTTTTGAATACTATACTATTTaaggttgttgtttttttatggtTATGGTTACAACAAGTTACAAGTCTTGGTTCCATGTCATCAATTGCTGTCTCTTATGGAGATAAAGGTTCTGCTTTTTGTGGTTTGAAATCAGATGGATCTCACACAGTTACATGTTATGGATTCAACTCAGCTATAGTTTATGGAACACCATCTCATTTTCCATTCATTGGTTTAACTTCTGGTGATGGTTTTGTTTGTGGACTTTTAATGAGTTCAAATCAACCATATTGTTGGGGGAGTAGTAGTCATATAGAAATGGGTGTACCACAACCTATGGTTAAAGATGCTCAGTACTTAGAAATCAGTGCCGGCGATTATCATGTTTGTGGATTGAGGAAACCTTTGACAGGAAGATACAGAAACATTTCTTATGTTGATTGTTGGGGCTACAACATGACAAAGAACTATGTTTTTGATGGACAGATTCAATCGATTTCGGCAGGTTCGGAGTTCAACTGTGGACTTTTTTCGCAGAATCGGACGGTTTTTTGTTGGGGTGATGAGGTTAGTAGTCAAGTTATTAGGTTGATTCCACAAGGTATGAGGTTTCAGAAGGTGTCTTGTGGAGGGTATCATGTATGTGGAATTTTGGAAGGTGTGAATTCTAGAACTGTTTGTTGGGGGAGAAGCTTGGATATGGAGGAAGAAATTTCATTGATTCCTAATCAAGGACAAGGTGGTAGTGTTGAGTTGGCACCAAATGATCCTATGCTTTCTGTTGTTGGAGGAAAGTTTCATGCTTGTGGCATTAAGAGCTATGATCATGGTGTGATTTGTTGGGGGTTAAGTTTGAAAACAAGTACAAAAGTTCCTAAAGGGATTAAAGTGTTTGAAATTGCAGCTGGTAATTATTTTACTTGTGGAATTCTTGCTGCAAAATCTCTTGAGCCTATTTGTTGGGGTGTTGGATTTCCAACTTCTGTTCCTTTGGCTGTTTCACCAAGAAAGTGTTTGTCTACACCTTGTTCTTCAGGTTACTATGAAATTGAAAAGGATCAACAAAAGGGTGATCTAATTTGTAAGGATCCAGATTCTCACCTTTGTGTTCCTTGCAGTAGTGTTTGTCCTGATGAAATGTATCAGAAAAGTGGTTGCAATTTGAAATCTGATATATTATGTCAATATAATTGTTCGGTTTGTTCTTCACCTGAATGCTTCTCAAATTGTTCCTCCTCTTCTTCATCCAATGCTGCTAATgggaagaaaaatgaaagatttTGGTCTATGCAATTGATAGTTATTGTTGCTGAGATAGTATTTGCTATTTTTATAGTTAGTGTTGTGTCTATAACCGCGGTTATGTACGTTCGCTACAAGCTGAGAGGTTGTGAGTGTTCAACAACAGCGTTAAACTCGGTGAAGAGACTCAATGTTAGTTCTTCGGTTCAAAAGGAGAACGGTAAGATTCGACCGGACGCAGAGGAGTTCAAGATAAGGAGGGCTCAGAAGTTCACCTATGAGGAACTTGAAAATGCAACTAGCGGATTCAAAGAAGAATCCATAGTTGGAAAAGGAAGTTTTTCATGTGTGTTCAAAGGTGTTCTCAAAGATGGAACAGTTGTTGCTGTTAAAAGGGCTATTATGTCTCCAAACATGCAGAAAAATTCTAAAGAGTTTCACACTGAACTTGATTTGCTCTCTAGGTTAAACCATGCTCATTTGCTCAACCTATTAGGTTATTGTGAAGAAGGTGGTGAAAGACTACTTGTTTATGAGTACATGGCTCATGGATCATTGCATCAACACCTCCATGGCAAAAGTAAAGAATTCAAAGAACAATTGGATTGGATCAGAAGGGTAACAATTGCAGTCCAAGCGGCTCGAGGAATCGAGTACTTGCACGGCTACGCGTGTCCGCCTGTGATTCACAGAGATATCAAATCTTCAAACATACTCATTGATGAAGAACACAATGCTAGAGTTTCGGATTTCGGTCTGTCGTTACTAGGTCCAACAGATAGTAGCTCACCACTAGCCGAGTTACCGGCCGGAACACTCGGTTATCTTGATCCCGAATACTATAGACTTCACTACCTCACAACAAAATCAGATGTTTATAGCTTTGGTGTTCTACTATTAGAAATCCTAAGTGGTAGAAAAGCTATTGACATGCAATATGAAGAAGGTAACATTGTTCAATGGTCAGTTCCATTAATAAAATCAGGCGATATAGCTTCGATTTTAGACCCTTGTTTGAAACAACCTTCTGATATTGAAGCATTGAAAAGAATAGCAAATGTTGCATGTAAATGTGTGAGAATGAGAGGTAAAGATAGACCTTCAATGGACAAAGTAACAACAAGTTTGGAAAGAGCTTTAGCAATGTTAATGGGAAGTCCTTGTATTGATCAACCAATTTTACCAACTGAAGTTGTTTTAGGAAGTAATAGAATGCATAAGAAAACATCTCAAAGGTCTTCAAATAGGTCGGCTTCTGAAACCGATGGAGTCGAAGGCGAAGATCAAAGATTTGAGTTTAGAGCACCTTCTTGGATAACTTTTCCAAGTGTTACTTCATCTCAAAGGAGAAAATCTTCAGGATCAGAATGTGATGTTGAAGTGAAGATTATTGAAGGAAGAAATTATGGTAATGTTGTTGGTGGAGGTGGTGATGTTTTGAGAAGTCTTGAAGAAGAGATTGGTCCTGCTTCTCCTCAAGAGAGACTCTTCTTGCAACACAATTTCTAA 2766 0.3778 MGFSKKQFLTYLLNTILFKVVVFLWLWLQQVTSLGSMSSIAVSYGDKGSAFCGLKSDGSHTVTCYGFNSAIVYGTPSHFPFIGLTSGDGFVCGLLMSSNQPYCWGSSSHIEMGVPQPMVKDAQYLEISAGDYHVCGLRKPLTGRYRNISYVDCWGYNMTKNYVFDGQIQSISAGSEFNCGLFSQNRTVFCWGDEVSSQVIRLIPQGMRFQKVSCGGYHVCGILEGVNSRTVCWGRSLDMEEEISLIPNQGQGGSVELAPNDPMLSVVGGKFHACGIKSYDHGVICWGLSLKTSTKVPKGIKVFEIAAGNYFTCGILAAKSLEPICWGVGFPTSVPLAVSPRKCLSTPCSSGYYEIEKDQQKGDLICKDPDSHLCVPCSSVCPDEMYQKSGCNLKSDILCQYNCSVCSSPECFSNCSSSSSSNAANGKKNERFWSMQLIVIVAEIVFAIFIVSVVSITAVMYVRYKLRGCECSTTALNSVKRLNVSSSVQKENGKIRPDAEEFKIRRAQKFTYEELENATSGFKEESIVGKGSFSCVFKGVLKDGTVVAVKRAIMSPNMQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEYMAHGSLHQHLHGKSKEFKEQLDWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVSDFGLSLLGPTDSSSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVQWSVPLIKSGDIASILDPCLKQPSDIEALKRIANVACKCVRMRGKDRPSMDKVTTSLERALAMLMGSPCIDQPILPTEVVLGSNRMHKKTSQRSSNRSASETDGVEGEDQRFEFRAPSWITFPSVTSSQRRKSSGSECDVEVKIIEGRNYGNVVGGGGDVLRSLEEEIGPASPQERLFLQHNF 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05302 921 SUPERFAMILY RCC1/BLIP-II 33 288 IPR009091 -
Tsu02g05302 921 SUPERFAMILY Protein kinase-like (PK-like) 504 795 IPR011009 -
Tsu02g05302 921 Gene3D Transferase(Phosphotransferase) domain 1 600 803 - -
Tsu02g05302 921 MobiDBLite consensus disorder prediction 822 839 - -
Tsu02g05302 921 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672|GO:0006468
Tsu02g05302 921 Gene3D Phosphorylase Kinase; domain 1 478 599 - -
Tsu02g05302 921 MobiDBLite consensus disorder prediction 821 848 - -
Tsu02g05302 921 Gene3D - 84 341 IPR009091 -
Tsu02g05302 921 ProSiteProfiles Protein kinase domain profile. 522 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g05302 921 SMART serkin_6 522 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g05302 921 Pfam Protein kinase domain 522 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g05302 921 ProSitePatterns Protein kinases ATP-binding region signature. 528 550 IPR017441 GO:0005524
Tsu02g05302 921 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 347 399 IPR001368 GO:0005515
Tsu02g05302 921 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 8 921 - -
Tsu02g05302 921 PANTHER RECEPTOR-LIKE KINASE 8 921 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05302 Tsu-Chr2 61738236 61741777 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05302 16 921 Receptor kinase-like Gene Family AT3G59420 67.325 0.0 1239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Tsu02g05302 Pkinase 2.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05302 - - gmx:100809215 1442.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02244 02 22506332 22510500 Tsu02g05302 02 61738236 61741777 PCT