Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05292 ATGATGGATCACCAATCTGGCCAGGGATTTAATTCATATGGTAGTGACCTTAACGTGTTAGCAGAAACCAGTGAGAAACATGACAAAGTAGACGGCAGCATTTCAAACAATTTAGAATTATGTGCAGTTGAAGATGAAAGGTTTGTTGACCAACCTGTGGCAGATTTAGACACAATAGAACCATTCATAGGCATGGAGTTCAACACAAGAGAGGAAGCCAGAGAGTTCTACAATGCCTATGGTAGACGGATTGGATTTACAGTACGAGTACACCATAACCGCCGTTCACGAGTTAATAACGAGGTTATTGGTCAAGATTTTGTCTGCTCAAAAGAAGGCTATCGAGCAAAGAAGTATGTGCACAGAAAAGATAGAGTGCTCCCTCCTCCGCCACCCACCCGAGAAGGTTGTCAAGCCATGGTAAGGATGACTTTACAAGATGGAGGGAAGTGGGTTGTCACCAAATTTGTGAAGGAGCATACACATAAACTGATGAGTCCTAGTGAAGTTCCATGGCGAAGATCTGGGAAGCACTTGATTAGTGAGGATGAGAAAGATAGGAGAATCCGTGCGCTATCACTTGAGTTGTACAACGAAAGGCAAAAGTACAAACGACGTTGTGCAGCATATGAAGAACAGATAAATATGATTCTGAATGATGTGGAAAGGCACACAGAACACATCTCTAAAAAAGTTGCGGATGTAGTCCGAAATATAAGAGAGATTGAGGAAGAAAAATCAGAGTCAAATGGAAAGTAA 759 0.419 MMDHQSGQGFNSYGSDLNVLAETSEKHDKVDGSISNNLELCAVEDERFVDQPVADLDTIEPFIGMEFNTREEAREFYNAYGRRIGFTVRVHHNRRSRVNNEVIGQDFVCSKEGYRAKKYVHRKDRVLPPPPPTREGCQAMVRMTLQDGGKWVVTKFVKEHTHKLMSPSEVPWRRSGKHLISEDEKDRRIRALSLELYNERQKYKRRCAAYEEQINMILNDVERHTEHISKKVADVVRNIREIEEEKSESNGK 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05292 252 Pfam FAR1 DNA-binding domain 75 165 IPR004330 -
Tsu02g05292 252 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 251 - -
Tsu02g05292 252 PANTHER FAR-RED IMPAIRED RESPONSE-LIKE PROTEIN 2 251 - -
Tsu02g05292 252 Coils Coil 193 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05292 Tsu-Chr2 61687134 61690569 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu02g05292 FAR1 1.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05292 - - gmx:100813124 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05292 02 61687134 61690569 Tsu02g05292 02 61687134 61690569 ECH