Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05276 ATGGATCCTGAAAGATCAATAGAGGAGCAATTCTCCAAGCTACATCCTTCATTGCCAGTAAACACCAGAATTGGAATAGTTGGTGGTGGTCCAAGTGGCATATCAGCTGCTTATGCATTGGCAAGGCTTGGTTATAATAATATCACTGTCTTGGAGAAACACCATGCAGTTGGTGGCATGTGTGAATCAGTAGAAATTGAAGGAAAAGTTTATGATCTTGGTGGGCAAGTTCTGGCTGCAAGCAGTGCTCCTGTCATCTTTCACTTAGCAAAAGAGACAGGTTCTGCACTAGAAGAATTGGACTCTCACAAGCTTGCTGTCATTGACACTTCCTCAGGAAAATACCAAGATATTAAAGTTGCTGATGATTATGTATCTGTTATGTCACTTACATTGAAAATTCAAGAAAAGGTGAAGAATTCTGGTCGTTTTGGGGTCCACGCTGTCAGTGAATTTGCCGCGGACTTAACTCCAGAATATCTTGAGAGTAATGGACTCAAATCAGTTCCTAAATCTGTTGCTTATGGTTACACTGCTTCAGGATATGGATTCATACAAGACATGCCTTATGCATACATTCATGAATTTACCAGAACGTCCATGGCTGGAAAAATTCGAAGATTTAAAGGTGGATATACAAGTCTTTGGCAGAAGATTGCAGAGTCACTTCCTATAAAGCTTCACTGTAACACTGAAGTGTTAACAATAAGGCGGAATTCTGACAATGTTGCTGTTAATGTCAAGAGCTCAAATGAAATTGAAACTATGGAATTTGATAAGATCATTGTCTCTGGTAACTTTCCATTAAAATATGGAAGAACTTATAGATCAGTGCATTCAACTTGCATAGATAGTGAAGCACAAGTGATGGATGCTAGTGACATCGAAAAGGAGCTATTCAGTAAAGTAGAGACAAATGACTACTACACCACTGTTTTTAAGATCAAAGGGCTGGATCATATGCCAGTtggattttattattttaatgaatataTGGAAGATCCATGTACGATCGGAAATCCAGTTGCCATGCAGAAGTTTTACGCCAACTCTGATATATTCTTGTTCTGGTCTTATGGAAACTCCTTTGATATTAAGGGACCAACTATCACTGAGCTTGCAATCAAGGCGATAGAAGCCATAGGGGGAGAAGTTGAGGGCTTCATTCTTCAGCGTCGCTTTAATTATTTCCCTCATGTTAGCAGCCAAGATATGAAAAACGGATTCTATGAAAAGTTGGAATCAGAGCTCCAAGGTTCAAGGAATACTTATTATGTCGGTGGACTTATGGCATTTGAGCTCACAGAGAGAAATTCATCTTATGCCATGGCTCTTATGTGCAAGAACTTTGCAAATAGAAGTGATTTGCCAGTGTTTCCTTATACTAAGAGTTTGTTTCCTTTGCAAACTGAGTTTCAGAGAAAGGAACCTAAACAACTAGCTGAATTGCCCGGCGTGCAATTTCCCGATTTGCCGACTTTGAATAGTTATTTAAAGCACTGGGGAACTCATCCAGTCACTCAAGACAGAACCCTTTATAGTTGGATAAATGAAGAAGGGATGGTGACAGGTAAGAGGACATATAGAGAGCAACATTTATATGCTTCTTGCATTGCAAATAAGCTCTTAAAAAGCCAAAAGCCAGTTATCAAGCCTGGTGACAAGGTTCTTCTGGTCTACGTTCCCGGTCTAGATTTCATCGATGCATTCTTTGCATGCTTAAGAGCTAAAGTTATACCAGTTCCGGTTCTTCCTCCAGATCCCATGCAAAGAGGTGGACAAGCACTTTTGAAAATTGAGAACATTGCCAAGTCATGTGGCATAGTTGCAATTTTATCAACAGTAGCTTATCACTCAGCAGTCCGAGCAGGTTCAGTGAAAAACTTCATCACATTGAAAAATGGGAAATCTTCAGCTCGGTGGCCGAATCTTCCGTGGTTGCACACTGATACTTGGATCAGTAATTCAAGAAGTTCTGCGATGGAGGATTTATATGGTGATCAGTGTGAATCTCAGCCTGCTGATATATGTTTCTTGCAGTTTACTTCAGGCTCGACCGGTGATGCTAAAGGAGTCATGATCACCCATGGAGGTCTAATTCACAATGTAAAGCTGATGCAAAGAAGATACAAAAGTACCTCAAGGACTGTACTAGTGAGCTGGCTTCCTCAGTATCATGACATGGGGCTGATTGGAGGACTTTTTACAGCTCTTGTTAGCGGTGGAACTGCCCTTCTGTTTTCACCAATGACATTCATCAAGAAGCCACTCTTATGGATAGAAACCATGAGCAAGTATCAAGCAACTCACAGTGCTGGACCTAACTTTGCTTTCGAGTTAGTAGTTCGAAGGTTAGAGTCTGACAAGGATAAACTTCATAACCTAGACCTTTCCTCCATGATTTTTCTTATGGTTGCTGCTGAACCAGTGAGACAGAAGACTTTGAAAAAATTTCTTGAGCTAACCGGTCCTTATGGGTTGTCTCAAAAGGCGATGGCTCCTGGATATGGCTTAGCAGAGAATTGTGTGTTTGTCAGTTGTGCATTTGGAGAAGGCAATCCTATTCTTGTTGACTGGCAGGGACGGGTTTGTTGTGGATATGCTCATCCAGCGAATGCAGACGTTGACATCAGAATAGTTGACCCAGATGGTGGCGAAGAGCTTCAGGAAGATGGAAAAGAAGGAGAAATCTGGATCAGTAGTCCAAGTGCAGGAATAGGATATTGGGGGAAGGAAGAATTGAGTCAGGCAACTTTTCAAAATCAGCTTCCAAACCATCCTGGACGCTTCTACACAAGAACCGGAGACTTGGGAAGGATAATAGATGGAAAGCTATTCATCACTGGAAGAATCAAAGATCTTATCATTGTTGCTGGAAGAAACATCTATTCCTCAGATGTTGAAAAGACTGTTGAGAGTTCGTCTGAATTTCTCCGTCCAGGATGCTGTGCTGTCATTGGTGTCCCTGAAGACACTTTATCAGCCAAAGGAATTTCCTTGCCAGATGGTTCTGATCAGGTTGGTTTGGTTGTGATTGCAGAACTGAGGGATGGTAAACCAGTTAGCAAGGATGTGGTCGAAGGTATTCAGGCTCGTGTGGCGGAAGAACATGGAGTCAATGTTGCTTCTGTCAAGTTGATCAAGCCTAGAACCATCAGCAAAACAACATCAGGAAAAATTAGAAGGTTTGAATGTCTCAAACAGTTCGCAGATGGAACACTGAATTTGGTACCACAACCAGTTTTGACAAAGAAAGCACTGGTAAGGTCATTCACTACAGGAACTTGTAAAGAAGGAAGAACACCCCGGGCACGGCTAGCGAATAGTACACCTATAACTAGGCAGAGAATCAGTAACAAGGAAATTATGGAATTCTTGAAAAGGCTTATTTCTGAGCAGGCTGGAATCTCGGTAAGCAACATATCTGTCACAGACAACATGTCAACCTATGGAATGGATTCAATCGGTGTGGTTAAAGCAACTCAAAAACTCTCAGATTTCCTTGGAGTTCCAGTTGCAGCTATAGATGTTTTCAGTGCATCCTGCATTCAAGAATTGGCCAACTTCTCAGAGAATCTTCTGTTGAAGTCACAACCTCACCTTATGAGCAATCCATCCTATGCTCCAGAAGCTGAAACTGAATCTACTGAATTTTTTGTGGATGTGTCGAAGTCTCACCGGTGGAGTATATGTTTACTTCAACTCTTGGCACTTGTTTTCATTTCTATCCTTTTGGTTTCTCCTGCTTATCTTTCCATCACTACTTTTCAAAGTCTCATCACAAGTTTCAGTAAACCAGCATATGGAATTCCTTGGtcaaactatttattttcacTTGCTTTGGCACCACTTTCTTGGATCCTTTGCATTGCTTCTACATGCATTTGCATTTCATTTTTTGGAAACTCATTCTTGAGGCCAAACTATGCTCTTACTCCTGAAATATCCATCTATTCAATGGCCTTTGTCAAGTGGTGGGCACTTTATAAAAGTCAGGAAATTTCTTCCAAAGTACTGGCTACACACCTCAAAGGAACAGTGTTTTTGAAGTACTGGTTTGAGATACTAGGTGCAAGAATTGGATCCTCAGTTTTGCTTGACACGGTCGACATCACAGACCCATCTCTAGTTTCAATTGGTGATGAAGCTGTCATTTCTGAAGGGGTTTTGGTTCAAAGCCACGAGGTAAAGAATGGAATTCTAAGTCTCCATCCTATTCGGATCGGCCGAAATTCTTCCATTGGACCTTATGCTGTTATTCAAAAAGGAAGTTTTATTAAAGAAGGAGCTGAGGTACAACCACTACAAAAAGTTGAAGGAGGCCAGCATGTTCTCAATCCTACAAAGCTTAATAATATTAAAGAGAATGCAGTGTTGCTTGTTACAACCAGCAAAACTGAGTCTGATGCTATATACCATTTTATGGGGATTTATCTTGTTGGCTTTCTAAGTTCCCTTGCTGCAGCTATTACTTACTTCACGTATACATGGTTCTTCCAAAAACCTGCTTCAATCCAaagcttttcatttgtttgcATATGTGGAGCCTTCCATTGGATACCATTTACTATTATAGCATATGCTGCCATGTTTTCTGAAGTTCCATCAAATCCATTTACCTTTTCCATTTCCTTTGCATGTGCATACTTGCTTCATGGTCTCATACTCACCTCACTCACCTGTTCTTTGACTTATTTACTGAAAATTCAAAAGCAAACACACTTCAAAACCTGGCTTAGAAACCAATTGACCCTTTCCTGCCATCTTAGATTTGCAAAGCTTCTCTCAGGAACAGAAGCCTTCTGCATATACTTACGCCTTCTCGGAGCTAAAATTGGCAACCATTGTTCCATTAGAGCCATCAATCCAGTTTCAAACCCCGAGTTAATGTCGATTGGTGATGGTGTTCATCTTGGTGACTTTAGCCGCATAATCACTGGTTTCAATTATTCCAATGGATATACTTGTGGGAAAATAGAGGTTCAAGATAACTCAGTTGTTGGTAGTCAAAGCCTAATTCTCCCCGGTTCTCTTGTTGAAAAGAATGTCATTCTGGGTGCACTTTCAGTTGCTCCAATGAATTCTATACTCCATGAAGGTAGTGTTTACATCGGATCTCAAACCCGAGTTACAATGAGGAACTCAGGAAATGCTAATTTTGATGAAAGAATCGAGGAGATGGACATGGACTACAAGAAAATAGTTGCAAATTTGGCTGCAAATTTAGCTGTAACAACTATGAATGCTAAAGCAAGATATTTTCATCGCATCGGTGTTAGCGGAAAAGGGCACTTGAAAATATACAACAAACTTGAGGGTATTCCAATGCACAAGATTTTTCACCCTGGAAAAAGCTACCCTATCATAGTGAGACATAGTAATAGCTTGAGCGCTGATGATGATGCAAGGATTGATGCACGTGGTGCTGCTTTGAGGATACTTTCTGATGAACCTGCTACAGATTCTTCTGATTCTCTTCCTCCTACTCTCATTGACTTAACACTAAAAACAGGAAATGCATTTTATGCTCGAACTCTTGCTGATTTTGCAAGCTGGCTTGTGTGTGGACTTGCTGCAAGGGAAGAACTAGTAAAGAATGCTCCACATGTCCGCGATGCAGTGTGGAATTCTCTCAGACATGCTGATTCATATGCTGAAATGCATTACTTCTCAAACTATTGCAGGCTCATGCGGTTTGAAGACGGACAACAAATGTATGTGAAATTCAAGTTAAGGCCTCATGACACAAGCATCAATGAAGACAAAGGTAAAGTTATTCCAACAGGAATTCTTCCACCAGAGACAGGTGCAATTCCTAGAGACGAAAATGATTCACGTCCTTTGCTTTTCCTTGCTAACGAATTTCAAAACCGTGTCAGTTCCTCCAATGGAGTTTCTTATGTTTTCCAAATTCAAGTAAGACCAGTTCCAGACAATGAACAAGGCCGTGAAATTGCATTGGATTGTACTAAACCATGGGATGAAAATCAATTCCCTTTCATTGATGTCGGAGAGATTAACCTCAATGAGAATCTTTCAATGGAAGAATCACAAAAGCTCGAGTTTAATCCTTACCTCAAAAGCAATGAGTTGGATGCAATTTCAGCTACTTCCAGCACACAAAGCGCTTCAATTGATCACGGCCGTTCACTAATCTACGAGATTTGTCAGCACGTCCGCAACAGACAGCCAATCCCAGAAGCTTGGAGAAACCTTGTACAACAATCCAGTGTTAAAGTTGACTTGTCCTGCTGTCCAATGGCATCACCAGCAGCACCATTACCCGAAAAAGAACCACTGTTGAACAAAGCACCACCGGCATTAACATTGACAAGAACATGGTACCAAACTTTCTCAGCACTCTTGATTCAGCCATTACTACAAACAGTTTTACCTCACATGGTAATTGCTTTATCAATTTATGTTCCTCTGAACTTGGTTCTTTATTTTAAGGATGTCAAAAAACTTCCACTACATTGGTTACTTCCATTCTTTTGGATTCTCTCAGATATTGACATGGATGGTACTTATGTAGATAGTAATGGAACAATGTTAAATCCTGAAATGGTGAAAATTGAAAGAGGTGGTTGTGTTGGAAAAGATGCATTGTTGTTTGGACATATATATGAAGGTGAAGAAGGTGGAATGGTGAAATATGGAGAGATTAAGATTGGTGAAGATGGGTTTGTTGGAAGTAAAGCTGTGGTTATGCCTGGTGTGGAAATTGAGAATGATGCTAATCTTGCTGCTTTATGTCTTGCTATGAAAGGAGAAATTATTAGGTCAAGATAG 6792 0.4031 MDPERSIEEQFSKLHPSLPVNTRIGIVGGGPSGISAAYALARLGYNNITVLEKHHAVGGMCESVEIEGKVYDLGGQVLAASSAPVIFHLAKETGSALEELDSHKLAVIDTSSGKYQDIKVADDYVSVMSLTLKIQEKVKNSGRFGVHAVSEFAADLTPEYLESNGLKSVPKSVAYGYTASGYGFIQDMPYAYIHEFTRTSMAGKIRRFKGGYTSLWQKIAESLPIKLHCNTEVLTIRRNSDNVAVNVKSSNEIETMEFDKIIVSGNFPLKYGRTYRSVHSTCIDSEAQVMDASDIEKELFSKVETNDYYTTVFKIKGLDHMPVGFYYFNEYMEDPCTIGNPVAMQKFYANSDIFLFWSYGNSFDIKGPTITELAIKAIEAIGGEVEGFILQRRFNYFPHVSSQDMKNGFYEKLESELQGSRNTYYVGGLMAFELTERNSSYAMALMCKNFANRSDLPVFPYTKSLFPLQTEFQRKEPKQLAELPGVQFPDLPTLNSYLKHWGTHPVTQDRTLYSWINEEGMVTGKRTYREQHLYASCIANKLLKSQKPVIKPGDKVLLVYVPGLDFIDAFFACLRAKVIPVPVLPPDPMQRGGQALLKIENIAKSCGIVAILSTVAYHSAVRAGSVKNFITLKNGKSSARWPNLPWLHTDTWISNSRSSAMEDLYGDQCESQPADICFLQFTSGSTGDAKGVMITHGGLIHNVKLMQRRYKSTSRTVLVSWLPQYHDMGLIGGLFTALVSGGTALLFSPMTFIKKPLLWIETMSKYQATHSAGPNFAFELVVRRLESDKDKLHNLDLSSMIFLMVAAEPVRQKTLKKFLELTGPYGLSQKAMAPGYGLAENCVFVSCAFGEGNPILVDWQGRVCCGYAHPANADVDIRIVDPDGGEELQEDGKEGEIWISSPSAGIGYWGKEELSQATFQNQLPNHPGRFYTRTGDLGRIIDGKLFITGRIKDLIIVAGRNIYSSDVEKTVESSSEFLRPGCCAVIGVPEDTLSAKGISLPDGSDQVGLVVIAELRDGKPVSKDVVEGIQARVAEEHGVNVASVKLIKPRTISKTTSGKIRRFECLKQFADGTLNLVPQPVLTKKALVRSFTTGTCKEGRTPRARLANSTPITRQRISNKEIMEFLKRLISEQAGISVSNISVTDNMSTYGMDSIGVVKATQKLSDFLGVPVAAIDVFSASCIQELANFSENLLLKSQPHLMSNPSYAPEAETESTEFFVDVSKSHRWSICLLQLLALVFISILLVSPAYLSITTFQSLITSFSKPAYGIPWSNYLFSLALAPLSWILCIASTCICISFFGNSFLRPNYALTPEISIYSMAFVKWWALYKSQEISSKVLATHLKGTVFLKYWFEILGARIGSSVLLDTVDITDPSLVSIGDEAVISEGVLVQSHEVKNGILSLHPIRIGRNSSIGPYAVIQKGSFIKEGAEVQPLQKVEGGQHVLNPTKLNNIKENAVLLVTTSKTESDAIYHFMGIYLVGFLSSLAAAITYFTYTWFFQKPASIQSFSFVCICGAFHWIPFTIIAYAAMFSEVPSNPFTFSISFACAYLLHGLILTSLTCSLTYLLKIQKQTHFKTWLRNQLTLSCHLRFAKLLSGTEAFCIYLRLLGAKIGNHCSIRAINPVSNPELMSIGDGVHLGDFSRIITGFNYSNGYTCGKIEVQDNSVVGSQSLILPGSLVEKNVILGALSVAPMNSILHEGSVYIGSQTRVTMRNSGNANFDERIEEMDMDYKKIVANLAANLAVTTMNAKARYFHRIGVSGKGHLKIYNKLEGIPMHKIFHPGKSYPIIVRHSNSLSADDDARIDARGAALRILSDEPATDSSDSLPPTLIDLTLKTGNAFYARTLADFASWLVCGLAAREELVKNAPHVRDAVWNSLRHADSYAEMHYFSNYCRLMRFEDGQQMYVKFKLRPHDTSINEDKGKVIPTGILPPETGAIPRDENDSRPLLFLANEFQNRVSSSNGVSYVFQIQVRPVPDNEQGREIALDCTKPWDENQFPFIDVGEINLNENLSMEESQKLEFNPYLKSNELDAISATSSTQSASIDHGRSLIYEICQHVRNRQPIPEAWRNLVQQSSVKVDLSCCPMASPAAPLPEKEPLLNKAPPALTLTRTWYQTFSALLIQPLLQTVLPHMVIALSIYVPLNLVLYFKDVKKLPLHWLLPFFWILSDIDMDGTYVDSNGTMLNPEMVKIERGGCVGKDALLFGHIYEGEEGGMVKYGEIKIGEDGFVGSKAVVMPGVEIENDANLAALCLAMKGEIIRSR 2263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05276 2263 Gene3D - 1111 1193 IPR036736 -
Tsu02g05276 2263 PANTHER AMP-BINDING ENZYME 1 2171 - -
Tsu02g05276 2263 PANTHER AMP-BINDING ENZYME 2169 2263 - -
Tsu02g05276 2263 Gene3D Hexapeptide repeat proteins 2171 2256 - -
Tsu02g05276 2263 ProSiteProfiles Carrier protein (CP) domain profile. 1120 1194 IPR009081 -
Tsu02g05276 2263 Gene3D - 23 445 IPR036188 -
Tsu02g05276 2263 Gene3D - 94 202 - -
Tsu02g05276 2263 SUPERFAMILY ACP-like 1119 1201 IPR036736 -
Tsu02g05276 2263 Gene3D - 303 396 - -
Tsu02g05276 2263 Gene3D - 952 1080 IPR045851 -
Tsu02g05276 2263 SUPERFAMILY FAD/NAD(P)-binding domain 21 271 IPR036188 -
Tsu02g05276 2263 SUPERFAMILY Trimeric LpxA-like enzymes 2160 2258 IPR011004 -
Tsu02g05276 2263 PRINTS Adrenodoxin reductase family signature 23 45 - -
Tsu02g05276 2263 PRINTS Adrenodoxin reductase family signature 47 60 - -
Tsu02g05276 2263 SUPERFAMILY Acetyl-CoA synthetase-like 493 1077 - -
Tsu02g05276 2263 Gene3D Hexapeptide repeat proteins 1580 1708 - -
Tsu02g05276 2263 SUPERFAMILY Trimeric LpxA-like enzymes 1343 1441 IPR011004 -
Tsu02g05276 2263 Pfam Flavin containing amine oxidoreductase 32 265 IPR002937 GO:0016491
Tsu02g05276 2263 ProSiteProfiles catalase family profile. 1682 2263 IPR018028 GO:0004096|GO:0006979|GO:0020037
Tsu02g05276 2263 ProSitePatterns Putative AMP-binding domain signature. 679 690 IPR020845 -
Tsu02g05276 2263 Gene3D - 480 951 IPR042099 -
Tsu02g05276 2263 Pfam AMP-binding enzyme 523 957 IPR000873 -
Tsu02g05276 2263 Pfam Phosphopantetheine attachment site 1125 1189 IPR009081 -
Tsu02g05276 2263 Gene3D Catalase core domain 1709 2070 - -
Tsu02g05276 2263 Gene3D Hexapeptide repeat proteins 1328 1439 - -
Tsu02g05276 2263 SUPERFAMILY Heme-dependent catalase-like 1687 2061 IPR020835 GO:0020037
Tsu02g05276 2263 PANTHER AMINE OXIDASE 2169 2263 - -
Tsu02g05276 2263 PANTHER AMINE OXIDASE 1 2171 - -
Tsu02g05276 2263 SUPERFAMILY Trimeric LpxA-like enzymes 1603 1711 IPR011004 -
Tsu02g05276 2263 ProSitePatterns Phosphopantetheine attachment site. 1149 1164 IPR006162 -
Tsu02g05276 2263 SMART Phosphopantetheine attachment site 1123 1194 IPR020806 GO:0031177
Tsu02g05276 2263 CDD FAAL 499 1071 IPR040097 GO:0008610
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05276 Tsu-Chr2 61583022 61591292 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05276 643 990 Monolignol Biosynthesis Gene Families AT1G20480 26.216 1.34e-20 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05276 - - cam:101501314 3982.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05276 02 61583022 61591292 Tsu02g02205 02 21797576 21804796 PCT