Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05267 ATGGGAACCAAATCAAAAGGGAAAGACAAGGGGAAGCATAAGGAAGAAAGAAGCAACCGTCAAGTTCTTGGAGATATTGGTAATCTTGAGGGGAATGAGGTTTCAAGACCCATCACAAGgaatttccataaaaaattattggaaAAAGCAGAAGCTGCAGCTAGCTCGGCACCAGAATTAGATGTCCCGGCTAGTTATGACCAAGGAGTTGCACAAAAGAATCAAAATGTTGGTGATAATTGCGCTCAAAAGCCAAATCCTGAGCCTGTACATGTCGACAGTTCTGAAGCAGGAGAAAAACTCgatttaatttctaaaaaagAGGGCAGTGGAAGATCTTCTAGGGAGGACCGGATTCTGAATTCGCCACTTACTACAAAAAGCAAGCCAAATCCTGAGCCTGTAGATGTCAATAGTTCCAAAGCAGGAGAAAAAGTTGATTCAGTTCCTAAAAAAGAGGGAAGCGGAAAATCTGCTAGGGAGGACCAGATTCCGAATTCGCCACCTACTACAAAAAGCAAGATTGCTCGCAGAATCTTGATTGAGCCCGAGAATCAGCCTGTTGACATGGATGCAGACGATGATATTAATAATTTAGCAGCAGATGAATATCTCGATGAACTATACAATTTCTACAAGCTAACTGAAGTAAATGACTTGTTGGAGATATCAGATAAATTTTATAACAGAAGCCAGTTTATTTCAAGGGAGAGAGATATTGTCGAAAAGCTTCAATGGAATTTTACAGTAACTACACCTTATGTATTTTTAGTTCGACTTATTAGAGCATCTATTGTTCAAGATAAAGAGATGGAGAACATGGCATTTTACCTAGCAGAACTTGGTCTTGCAAATTATTATGTCATGGTATTATTCTCGCCTTCACAGATTGCTGCAGCGGCTGTTTACTCGGCTCGTTGTATACTCAATAGGATTCAATATTGGAATCAATATCTACAGAATCTAGCTGGTTACTGCATAGAACAAATCAAAGATTGCGCGAAGCTATTAGTGAGCATACACTCAAGTGCAGCAGATGTTAAAAACAAATCAGTGTACAACAAATTCTCAAGTCCTAGGAAAGGTCACATTGCTCTTTTACCACAGCCGCCTAACATCGAAGAAAGATTGTAG 1134 0.3871 MGTKSKGKDKGKHKEERSNRQVLGDIGNLEGNEVSRPITRNFHKKLLEKAEAAASSAPELDVPASYDQGVAQKNQNVGDNCAQKPNPEPVHVDSSEAGEKLDLISKKEGSGRSSREDRILNSPLTTKSKPNPEPVDVNSSKAGEKVDSVPKKEGSGKSAREDQIPNSPPTTKSKIARRILIEPENQPVDMDADDDINNLAADEYLDELYNFYKLTEVNDLLEISDKFYNRSQFISRERDIVEKLQWNFTVTTPYVFLVRLIRASIVQDKEMENMAFYLAELGLANYYVMVLFSPSQIAAAAVYSARCILNRIQYWNQYLQNLAGYCIEQIKDCAKLLVSIHSSAADVKNKSVYNKFSSPRKGHIALLPQPPNIEERL 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05267 377 Pfam Cyclin, C-terminal domain 252 369 IPR004367 -
Tsu02g05267 377 MobiDBLite consensus disorder prediction 145 159 - -
Tsu02g05267 377 MobiDBLite consensus disorder prediction 93 115 - -
Tsu02g05267 377 MobiDBLite consensus disorder prediction 116 135 - -
Tsu02g05267 377 MobiDBLite consensus disorder prediction 1 178 - -
Tsu02g05267 377 MobiDBLite consensus disorder prediction 68 82 - -
Tsu02g05267 377 SMART cyclin_7 255 339 IPR013763 -
Tsu02g05267 377 SUPERFAMILY Cyclin-like 252 372 IPR036915 -
Tsu02g05267 377 PANTHER CYCLIN-B1-4 15 216 - -
Tsu02g05267 377 PANTHER CYCLIN-B1-4 216 368 - -
Tsu02g05267 377 MobiDBLite consensus disorder prediction 1 21 - -
Tsu02g05267 377 PANTHER CYCLINS 216 368 IPR039361 -
Tsu02g05267 377 CDD CYCLIN 249 338 IPR013763 -
Tsu02g05267 377 PIRSF Cyclin_A_B_D_E 1 218 IPR039361 -
Tsu02g05267 377 PIRSF Cyclin_A_B_D_E 215 376 IPR039361 -
Tsu02g05267 377 Gene3D - 239 376 - -
Tsu02g05267 377 SMART Cyclin_C_2 251 370 IPR004367 -
Tsu02g05267 377 PANTHER CYCLINS 15 216 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05267 Tsu-Chr2 61499386 61503333 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05267 216 368 Core Cell Cycle Gene Families AT2G26760 44.444 1.64e-39 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05267 K21777 - jre:109013760 213.386