Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05263 ATGGATTCTTCTATTGTAATGGTTAACACAATTTCAGAACCTAATGATGAAATGGAATTTGAATCTCATGAAACTGCATATACATTTTACAAAGAATATGCTAAATCTGTAGGGTTTGGTACTGCTAAGTTAAGTAGTCGTCGGTCTAGGTCATCGAAGGAATTTATCGATGCTAAGTTTTCGTGCATAAGATATGGTAATAAGCAACAATCGGACGATGCGATTAATCCGCGTCCATCGCCGAAAATTGGTTGTAAAGCAAGTTTGCATGTGAAGAGAAGACAAGATGGTAAATGGTATGTTTATAGTTTTGTGAAGGAGCATAATCATGAGCTTTTACCTGCTCAAGCTCATTTCTTTCGAAGTCATAGGAATTCTGATCCGTTAAGTAATGATGTTCGGATGCGACGGAGGAAGAACTCAACTGCAGGTGGTAAATTGTTTAGTGCGTATCAGAATGTTGATTGTTTAGAGAATTTTATGAATCGTCAGCAGGATAAAGGACGTAGTTTGGTTTTAGAACCGGGGAATGCTCAATTGCTTCTTGAATTATTCATGCATATGCAGGAAGAGAAtcctaaattcttctatgcaGTTGATTTGAATGAAGAGCATCGACTTAGAAATGTGTTTTGGGTTGATTCTAAAGGGTTGGAAGATTTTGGTTATTTCTCTGATGTTGTTTCTTTTGACACAACATATTTCACTAGCAAGTATAAAATACCATTGGTGCTTTTCATTGGAGTTAACCATCATATGCAACTGACATTGCTTGGATGTGCATTGATAGCTGATGACATGGTATTTACTTTTGCTTGGTTACTGCAAACGTGGTTTATAGCAATGGGGGAACGTGCTCCACAAGTGATTCTGACCGACCAAAACGATGCTCTTAAAGCTGCTGTCGCTGCTGTTTTTCCAGGAACGCgtcattgtttttgtttgtggcATGTTTTGGAAAAAATACCGAAACAGCTTGAATTTTTAAGTACATGGCATGATAGCTTTATGGAAAAGTTTAACAAATGTATATATCAATCATGGTCAGAGGACCAATTCGAAAAGAGATGGTGGAAGCTGGTTGATAGGTTTAAACTTAGAGATATTAAGTGGGTCCAATCCTTGTATGATGATCGAGCAAGTTGGGTGCCAACTTTTATGAGGGATATTTCTTTTGCTGGCTTGTCTACTAGCTCGCGCTCAGAAAGTTTAAATTCCTTTTTTGATAAATATGTCCAAGTTGATACTTCATTGAGAGAATTTATAGATCAGTACCAACTGATTCTTGAAGATAGACATGAAGAGGAAGCCAAAGCAAATTTTGATGCTTGGCATGAAACACCTGAATTAAAGTCTCCTTCCCcttttgaaaaacaattgtTGTTAGTTTATACGCATGAAATCTATCAAAAATTTCAGTTTGAGGTTTTGGGCGCTTCTGCTTGCCAtctaaagaaagaaaatgatggTGTGATTAATAATTATGATGTGAAAGACTTCGAAAATAATCAGAACTCATGGATAGAATGGACACATCAACTCAAGATATANGTTGTCCTTGCAACTTGTTTTGAATNTAAAGGGTTTACCCTCTGTAGACATGGCATTGGTGTCCGGAGATTCAATGATTTGTGTAGACGAGCCATAATATTGGGTGAAGAAGGTTCTTTATCCCAAGAAAGTTACTATATGGCTTTAGGTGCCTTAAGTGAAGCTCTAAAGCAATGTGCAAATTTGAACAACTCTGTTGAGAATGCAGCGCTAGCTACCCATGTTGGTTGCAATGTTGAAGAAGAGTATCAATCTATTACTACATCTAATGATAAGGTCTCTGATCCAAAAATGAATACGGGTAAGAAAGCTGCGAGAACTGGCGTGGCTGGTAGGAGTTTAGGAAGTGTTGAAAATATTGAAGGAAATAAAGGAAAGGTGCCTCGGCTTGGAGCAGTAAGTGGTAGCAACGATGGTTTTCAACAAATGGAGCCTAATGATCTAAGGTCACATAATGCCATGCAAATGCAGTTTCACAGCATGCTGCCGGCAACTATGTTCAATAATGTTTCGTCCCCCTTTCACACTGCAACCTCAACTCATTTGCATGACAATCATCTTCCTCCTTAG 2121 0.3682 MDSSIVMVNTISEPNDEMEFESHETAYTFYKEYAKSVGFGTAKLSSRRSRSSKEFIDAKFSCIRYGNKQQSDDAINPRPSPKIGCKASLHVKRRQDGKWYVYSFVKEHNHELLPAQAHFFRSHRNSDPLSNDVRMRRRKNSTAGGKLFSAYQNVDCLENFMNRQQDKGRSLVLEPGNAQLLLELFMHMQEENPKFFYAVDLNEEHRLRNVFWVDSKGLEDFGYFSDVVSFDTTYFTSKYKIPLVLFIGVNHHMQLTLLGCALIADDMVFTFAWLLQTWFIAMGERAPQVILTDQNDALKAAVAAVFPGTRHCFCLWHVLEKIPKQLEFLSTWHDSFMEKFNKCIYQSWSEDQFEKRWWKLVDRFKLRDIKWVQSLYDDRASWVPTFMRDISFAGLSTSSRSESLNSFFDKYVQVDTSLREFIDQYQLILEDRHEEEAKANFDAWHETPELKSPSPFEKQLLLVYTHEIYQKFQFEVLGASACHLKKENDGVINNYDVKDFENNQNSWIEWTHQLKIXVVLATCFEXKGFTLCRHGIGVRRFNDLCRRAIILGEEGSLSQESYYMALGALSEALKQCANLNNSVENAALATHVGCNVEEEYQSITTSNDKVSDPKMNTGKKAARTGVAGRSLGSVENIEGNKGKVPRLGAVSGSNDGFQQMEPNDLRSHNAMQMQFHSMLPATMFNNVSSPFHTATSTHLHDNHLPP 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05263 706 MobiDBLite consensus disorder prediction 631 662 - -
Tsu02g05263 706 PANTHER PROTEIN FAR1-RELATED SEQUENCE 4 538 666 - -
Tsu02g05263 706 Pfam MULE transposase domain 227 320 IPR018289 -
Tsu02g05263 706 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 536 IPR031052 GO:0006355
Tsu02g05263 706 Coils Coil 569 589 - -
Tsu02g05263 706 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 538 666 IPR031052 GO:0006355
Tsu02g05263 706 Pfam FAR1 DNA-binding domain 28 114 IPR004330 -
Tsu02g05263 706 PANTHER PROTEIN FAR1-RELATED SEQUENCE 4 2 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05263 Tsu-Chr2 61459974 61463772 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu02g05263 MULE 2.2e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05263 - - gmx:100805273 1135.94