Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05261 ATGGATTCACCAACACCACCCAATACTCAACAAAACCTTAATCTCAACAACCTAAAACCACTCAAAATCTTAGGTAAAGGAGCAATGGGAACCGTTTTTCTCATTCAACAAAACAACACCACCAACATGGCACTCAAAGTAGTTGATAAATCCTCCACTCACGACGCCGAACGCCGCGCCCATTGGGAAATCCAAGTCCTATCAACTCTAGCCCACCCATTTCTCCCCTCGCTCCTGGGCTCTTTCGAAACAGCCCAATTATTAGGTTGGGCTGTTCCGTATTGCCCAGGAGGTGATCTCAACGTGCTCCGTTACCACCAAACGGATCATGTCTTCTCAACAACAGTTATCCGTTTCTATATAGCAGAAATTCTCTGCGCTCTCGACCATCTTCATACCATGGGCATCGCTTATCGTGACCTTAAACCTGAAAATGTTCTTATTCAACAATCTGGCCACGTCACCTTAACTGATTTCGATCTCTCACGTAAACTTTCTCACAAAACCGTTAAAATTGAAACCGTCGATGACAGAATCAATGAATCTCGCCGCAAAACTCGGCGGTGGCGGGTTCCACTAACGGAACCTAACGGAAAGATAGCACGAGTTATTCCGGTGAGTCGACGCGGGGTAAGTTTCTCCGACGGTGAACGGTCTAACTCGTTTGTCGGTACGGCGGAGTACGTCGCGCCGGAGGTTATACGCGGCGACGGACATGAATTCGCCGTTGATTGGTGGGCGTTTGGAGTATTAACTTACGAGATGTTGTATGGGAAAACGCCGTTTAAAGGGAAGAATAAGAAAGAAACGTTTCGAAACGTGCTTTTCAAGTCGCCGGAGTTTGTTGGAAGAAAAACGGCGTTAACGGATTTGATCGAACGGTTGTTAGAGAAGGATCCATTGAAGCGATTGGGTTATGGTGGTGGTGCTAGTGAGATAAAAGAGCATGAGTTTTTTAGAGGGGTAAAATGGGAAATTTTAACGGAGGTTGTACGGCCACCGTTTATTCCGTCAAAAGATGACGGTTATTTAACGGTGGATAAATTTGGTGAGGGAATAGTGAACATAAGTGATTATTTTGAGAAGTTGAAATCTCCGGTGGTGTTGCCGTCATCGCCGTTACGATCACCGTCATCTGAGTTTCGGGATAGTGTTTCTTTTGATGAGTTTTGA 1173 0.4561 MDSPTPPNTQQNLNLNNLKPLKILGKGAMGTVFLIQQNNTTNMALKVVDKSSTHDAERRAHWEIQVLSTLAHPFLPSLLGSFETAQLLGWAVPYCPGGDLNVLRYHQTDHVFSTTVIRFYIAEILCALDHLHTMGIAYRDLKPENVLIQQSGHVTLTDFDLSRKLSHKTVKIETVDDRINESRRKTRRWRVPLTEPNGKIARVIPVSRRGVSFSDGERSNSFVGTAEYVAPEVIRGDGHEFAVDWWAFGVLTYEMLYGKTPFKGKNKKETFRNVLFKSPEFVGRKTALTDLIERLLEKDPLKRLGYGGGASEIKEHEFFRGVKWEILTEVVRPPFIPSKDDGYLTVDKFGEGIVNISDYFEKLKSPVVLPSSPLRSPSSEFRDSVSFDEF 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05261 390 Pfam Protein kinase domain 215 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g05261 390 Pfam Protein kinase domain 21 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g05261 390 Gene3D Transferase(Phosphotransferase) domain 1 216 338 - -
Tsu02g05261 390 ProSiteProfiles Protein kinase domain profile. 18 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g05261 390 PANTHER FLIPPASE KINASE 1-RELATED 13 365 - -
Tsu02g05261 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Tsu02g05261 390 SUPERFAMILY Protein kinase-like (PK-like) 15 373 IPR011009 -
Tsu02g05261 390 PANTHER SERINE/THREONINE-PROTEIN KINASE UCNL 13 365 - -
Tsu02g05261 390 Gene3D Phosphorylase Kinase; domain 1 18 98 - -
Tsu02g05261 390 SMART serkin_6 18 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g05261 390 MobiDBLite consensus disorder prediction 371 390 - -
Tsu02g05261 390 Gene3D Transferase(Phosphotransferase) domain 1 99 169 - -
Tsu02g05261 390 ProSitePatterns Protein kinases ATP-binding region signature. 24 46 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05261 Tsu-Chr2 61433428 61434805 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05261 12 387 AGC Kinase Gene Family AT1G51170 58.186 2.98e-153 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Tsu02g05261 Pkinase 1.9e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05261 - K08286 gmx:100785281 497.664