Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05251 ATGAATGGTGGGTTTTTGAGTAGTATTTTGGACATTGAATCTTCATTTCAAAGGCAACAACAGACTCAGTTAGGTAATCCATCTGGTCAACAAGATATGAATATTATGACTGGTTTGGAAAATAAGAATCAATTTGATACAATTGAAGTCAAAAATTTGAATATGGGGTTGAATTTTGGTAAAGGTAAGGGAATAGCTAGTTCTAATCCTGCGAATAGTAATGAAATGAGCGAAGACGATGAGCCAGGTTATGCTGAAGATGGGAATTGCGAGAATTTTTACGATGGTGGTAGCAAAGGTAAAAAGGGGTCGTCTTCTCCTTGGCAACGAATGAAGTGGACGGATAATGTGGTTGGACTTCTTATAGCGGTAGTGAGTTGTGTTGGTGATGATGGAACAATTGGTGGTGTCGATGGGGGTGTTAAAAGGAAATCTGTGGTTTTACAGAAGAAGGGTAAGTGGAAAACTGTTTCTAAGATAATGATAAGTAAAGGTTGTCATGTGTCGCCGCAACAGTGCGAGGATAAGTTTAATGACTTGAATAAGAGGTATAAGAGATTGAATGAGATACTTGGTAGGGGAACTTGTTGTCAAGTGGTTGAGAATCCTGCGTTGATGGATTCAATGCCTAACTTGTCTGCTAAGGCTAAGGATGATGTTAGAAAGATATTGAGCTCGAAACATTTGTTTTATAAGGAAATGTGTGCATACCATAATGGACAAAGGATACCAAATAGCCATGATCTTGACTTGCATAGTTATTCGTTGGAGCACGGAAAGGACTCGAGAGATAACGATGGCTCTGAGGACGAAGATGAGGATAACAATGAAAGCGAGGGCGATGAGTTGGATAATAGAATTAATATTAATGCAGATGGGGGTGGAGGGAGAATGGAGGAGTTTTGTGATGGAAATAAGTTAAGTGAGGAGGATGACCACTTCTGGCCGCGATCTGTTGGGTTGGCAAAACTTGAGGTTGAAATGGCAAGGGTTTTTCAAGACCCTGCTAAGTCGCCGTGGGAGCGAAGAGAGTGGATTAAGGTTCAGCTGTTGAAGCTTGAAGAGCAAAATGTGGAGTACCAAGCCAGGGCTTTTGAACTTCAGAAACAACGGTTTAAGTGGTTAAGATACTGCAGCAAGAAGGATAGGGAGCTGGAGAAAATGACGATGGATAACAAGAGAATGAAATTGGAAAATGAGCGCAGAATCTTGAAACTGAAGCAGGGAGAGCAGGAAGCAGACTTCAGTAGGTCTGAGATGTCCTTAGACCCTACTTCCATTGGTATCAACAGGCCACGAGGGAGGGAACATATCAACTTGTCTAGGCAGCAGTAG 1335 0.4165 MNGGFLSSILDIESSFQRQQQTQLGNPSGQQDMNIMTGLENKNQFDTIEVKNLNMGLNFGKGKGIASSNPANSNEMSEDDEPGYAEDGNCENFYDGGSKGKKGSSSPWQRMKWTDNVVGLLIAVVSCVGDDGTIGGVDGGVKRKSVVLQKKGKWKTVSKIMISKGCHVSPQQCEDKFNDLNKRYKRLNEILGRGTCCQVVENPALMDSMPNLSAKAKDDVRKILSSKHLFYKEMCAYHNGQRIPNSHDLDLHSYSLEHGKDSRDNDGSEDEDEDNNESEGDELDNRININADGGGGRMEEFCDGNKLSEEDDHFWPRSVGLAKLEVEMARVFQDPAKSPWERREWIKVQLLKLEEQNVEYQARAFELQKQRFKWLRYCSKKDRELEKMTMDNKRMKLENERRILKLKQGEQEADFSRSEMSLDPTSIGINRPRGREHINLSRQQ 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05251 444 Pfam Myb/SANT-like DNA-binding domain 110 236 IPR044822 -
Tsu02g05251 444 PANTHER F16F4.11 PROTEIN-RELATED 6 418 - -
Tsu02g05251 444 MobiDBLite consensus disorder prediction 266 280 - -
Tsu02g05251 444 MobiDBLite consensus disorder prediction 64 109 - -
Tsu02g05251 444 Gene3D - 113 186 - -
Tsu02g05251 444 MobiDBLite consensus disorder prediction 256 303 - -
Tsu02g05251 444 Coils Coil 350 370 - -
Tsu02g05251 444 MobiDBLite consensus disorder prediction 408 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05251 Tsu-Chr2 61357159 61358743 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Tsu02g05251 Myb_DNA-bind_4 3.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05251 - - ccaj:109806698 646.351