Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05250 ATGATGGCTGATAGAAGACACCAGCATCCAACAGTAGCACAAAAATTTGGTTCACAATTTCATCTAAGATCAACCATTTCTCCACATGTTGCAACTTCCTATGGAAGTTTGGAAAAACCTTTTCTGTTTCAGCAACATGTTGGTTCAGTTGCTCAATCACATGTGTTTGTTCCGTCACCGTCGGAGAAAAACTTTGCAAGCTTTGCAACTGATTTTCTGATGGGCGGAGTTTCTGCAGCAGTGTCTAAATCTGCAGCCGCTCCTATTGAGCGTGTAAAGCTTCTGATTCAAAACCAAGATGAAATGATTAAGGCTGGTAGGCTTTCTGAACCTTACAAAGGTATTGGAGATTGTTTTGGAAGAACAATCAAAGATGAAGGATTTTCTTCACTTTGGAGAGGAAATACCGTCAATGTTATCCGTTACTTCCCAACACAGGCATTCAACTTTGCATTCAAAGACTACTTTAAGAAGCTATTTAACTATAAGCAAGAGAGGGATGGATATTTGAAAGTGTTTGCAGGAAATATTGCATCTGGTGCTGCAGCAGGAGCTTCATCCTCCGTCTTTGTTTACTCATTGGATTACGCACGAACTCGCCTTGCAAATGACGCCAAGGCCACAAAGAAAGGCGGAGAGAGGCAATTCAATGGCTTGATTGATGTCTACAGAAAAACATTCCAATCAGATGGTATTGCTGGTCTTTATCGTGGCTTCAATGTTTCGATTGTTGGAATTATTGTCTACCGTGGTTTGTATTTTGGATTGTATGATTCTCTTAAGCCAATGCTCTTGGTAGGAACACTCCAGGATAGTTTCCTTGCTAGCTTTGTTCTAGGATGGGCTGTTACAGTTGGTGCTAGTGTTGCATCTTACCCTTTAGACACCGTCCGTAGAAGAATGATGATGACTTCAGGTGAAGCTGTAAAGTATAAGAGTTCTTTGGATGCTTTCTCACAAATTGTGAAAACTGAAGGTCCAAAATCTCTTTTCAAAGGTGCTGGTGCGAACATTCTTCGAGCTGTTGCTGGTGCTGGTGTGCTTGCAAGTTATGATAAACTTCAGGTTCTTATGTTGGGAAAGAAATATGGTTCTGGTGGAGcttaa 1107 0.4101 MMADRRHQHPTVAQKFGSQFHLRSTISPHVATSYGSLEKPFLFQQHVGSVAQSHVFVPSPSEKNFASFATDFLMGGVSAAVSKSAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFSSLWRGNTVNVIRYFPTQAFNFAFKDYFKKLFNYKQERDGYLKVFAGNIASGAAAGASSSVFVYSLDYARTRLANDAKATKKGGERQFNGLIDVYRKTFQSDGIAGLYRGFNVSIVGIIVYRGLYFGLYDSLKPMLLVGTLQDSFLASFVLGWAVTVGASVASYPLDTVRRRMMMTSGEAVKYKSSLDAFSQIVKTEGPKSLFKGAGANILRAVAGAGVLASYDKLQVLMLGKKYGSGGA 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05250 368 PRINTS Mitochondrial carrier protein signature 84 98 IPR002067 GO:0055085
Tsu02g05250 368 PRINTS Mitochondrial carrier protein signature 71 84 IPR002067 GO:0055085
Tsu02g05250 368 PRINTS Mitochondrial carrier protein signature 280 302 IPR002067 GO:0055085
Tsu02g05250 368 PRINTS Mitochondrial carrier protein signature 186 204 IPR002067 GO:0055085
Tsu02g05250 368 PRINTS Mitochondrial carrier protein signature 134 154 IPR002067 GO:0055085
Tsu02g05250 368 PRINTS Mitochondrial carrier protein signature 236 254 IPR002067 GO:0055085
Tsu02g05250 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 271 357 IPR018108 -
Tsu02g05250 368 SUPERFAMILY Mitochondrial carrier 64 353 IPR023395 -
Tsu02g05250 368 Pfam Mitochondrial carrier protein 67 162 IPR018108 -
Tsu02g05250 368 Pfam Mitochondrial carrier protein 173 264 IPR018108 -
Tsu02g05250 368 Pfam Mitochondrial carrier protein 272 359 IPR018108 -
Tsu02g05250 368 PRINTS Adenine nucleotide translocator signature 68 80 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Tsu02g05250 368 PRINTS Adenine nucleotide translocator signature 171 184 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Tsu02g05250 368 PRINTS Adenine nucleotide translocator signature 112 133 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Tsu02g05250 368 PRINTS Adenine nucleotide translocator signature 276 292 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Tsu02g05250 368 PRINTS Adenine nucleotide translocator signature 145 157 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Tsu02g05250 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 66 159 IPR018108 -
Tsu02g05250 368 PANTHER ADP,ATP CARRIER PROTEIN, MITOCHONDRIAL 2 368 - -
Tsu02g05250 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 171 263 IPR018108 -
Tsu02g05250 368 Gene3D Mitochondrial carrier domain 69 364 IPR023395 -
Tsu02g05250 368 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 2 368 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05250 Tsu-Chr2 61351363 61355353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05250 5 368 Antiporters AT5G13490 70.312 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05250 K05863 - gmx:100800843 566.229