Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05238 ATGGATTTCTTCTCATTGGAAACTAATTTGGAGAATGATCTAAATAACATGAGGAAATATTATGAGAgtggaaaaacaaaagaagcaTCATGGAGAGAATCACAACTAAAAGGGTTGCGTAACTTTGTCATAGAAAATGAGGAGAAAATCTTGAAATCCCTCAAGAAGGATTTAGGGAAGCATCATGTTGAGGCTTTTAGAGATGAGGTTGGACTTTTAAAGAGATCCATAGATTTGGCAATAAAATCCTTCAGAAAATGGATGGCTGGCAAAGAGGCTAAACTGCCACAAATAGCATTACTTTCAAGTGCAGAAATTGTTGCTGAGCCTCTTGGTCTAGTTCTCATAATCTCATCATGGAATATTCCTTTTgGATTGTCCTTGGAGCCATTGATTGGAGCTGTAGCTGCTGGAAACATTGTAGTCCTAAAGCCTTCAGAGATGGCCCctttttcatcttctcttcTAGCCAATGTTCTACCAAATTATTTAGACATTAATGGCATTAAGGTCATTGAAGGTGGACCAGAGGTGGGAGAGCAACTTCTACATAAAAAATGGGACAAGATTTTCTTCACAGGAAGTGCAAGAGTTGGGAGGATTGTTATGACTGCAGCAGTGGAGCATCTGACTCCTGTAACTTTGGAGTTGGGTGGAAAATGTCCAGCATTGATTGATTCACTTTCATCTTCTTGGGACAGAGAGATGGCTGTGAAACGAATATTGCTGGCAAAGTATGGGTCTTGTGCAGGACAAGCATGCATAGCAATTGATTATGTCCTTGTAGAAAAGAGTTTCAGTTCCACATTGgtGGAATTATTGAAGGAATGGATTAAGAAAATGTTTGGAGATAACCCAAAATCATCCAACATCATTGGAAGGATTGTTAATAAAAAACATTGCAACAGAATCAAGAGTCTTCTCGATGAACCTAATGTCAAAGAATCGGTGATTTTTGGTGGTTCAATGGACGAGGATGATTTATTTATGGAACCAACAATATTACTGGATCCACCACTTGAATCAGCAATCATGACAGAAGAAATCTTTGGACCCCTACTTCCCATAATCACCCTGGAAAAGATTGAAGATGGTATTGAATTCATAAACTCAAAGCCTAAACCTCTAGCAATTTATGCCTTCACAAAAAACCAAACTCTGCAGAGAAGAATGGTATCAGAAACATCATCTGGGTGTATTGTATTTAATGATGCAATTCTACAGTATATAGCTGATACCATCCCATTTGGAGGAATTGGTGAAAGTGGATTTGGCAAGTATCATGGGAAGTTCTCCTTTGACACATTCAGTCACCATAAGGCTGTGGCTAGAAGAAGTTactacactgatttttggttcAGGTTTCCTCCATGGAATCTTAATAAGTTCCAACTACTTGAAGAAGCTTATAATTTAAACTACATTGGAATACTTCTTGCATTACTTGGCTTAAAGAGATCAAAACGTTCATTATATCTGGCTTGTAATTGA 1491 0.3649 MDFFSLETNLENDLNNMRKYYESGKTKEASWRESQLKGLRNFVIENEEKILKSLKKDLGKHHVEAFRDEVGLLKRSIDLAIKSFRKWMAGKEAKLPQIALLSSAEIVAEPLGLVLIISSWNIPFGLSLEPLIGAVAAGNIVVLKPSEMAPFSSSLLANVLPNYLDINGIKVIEGGPEVGEQLLHKKWDKIFFTGSARVGRIVMTAAVEHLTPVTLELGGKCPALIDSLSSSWDREMAVKRILLAKYGSCAGQACIAIDYVLVEKSFSSTLVELLKEWIKKMFGDNPKSSNIIGRIVNKKHCNRIKSLLDEPNVKESVIFGGSMDEDDLFMEPTILLDPPLESAIMTEEIFGPLLPIITLEKIEDGIEFINSKPKPLAIYAFTKNQTLQRRMVSETSSGCIVFNDAILQYIADTIPFGGIGESGFGKYHGKFSFDTFSHHKAVARRSYYTDFWFRFPPWNLNKFQLLEEAYNLNYIGILLALLGLKRSKRSLYLACN 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05238 496 PANTHER ALDEHYDE DEHYDROGENASE 9 494 - -
Tsu02g05238 496 Pfam Aldehyde dehydrogenase family 17 442 IPR015590 GO:0016491
Tsu02g05238 496 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 18 440 IPR016162 GO:0016491
Tsu02g05238 496 PIRSF ALDH 3 481 IPR012394 GO:0006081
Tsu02g05238 496 PANTHER ALDEHYDE DEHYDROGENASE 9 494 IPR012394 GO:0006081
Tsu02g05238 496 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 219 422 IPR016163 GO:0016620
Tsu02g05238 496 SUPERFAMILY ALDH-like 15 459 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05238 Tsu-Chr2 61257406 61262339 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05238 5 486 Aldehyde Dehydrogenase Gene Family AT4G36250 52.905 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05238 K00128 - gmx:100819197 797.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05238 02 61257406 61262339 Tsu02g02174 02 21381908 21387758 PCT