Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05220 atgcatggattattattaacaaatctttctcttcttcctaACATGTTACTTTCTCTTCACCCCACTCACCGATTTCTTCAACCATCTTCATGCTTTCAATGCTtccaaaaccaaacaaattgtTCACTTTCCATACCCAGTTGCAAAATCAGTCATAAAAGATTTATACATCAGCATGAGAACAAAGGAAGAGGTAGCAATAGAATAACGTTTGTTGTAAGAGCAAAGCGTGGTGAATCTCCATATGAAGTTCTAGGTTTGTCTCCTTCTGCATCTGTGAATGAAATCAAGAAAGCTTATAGGAAACTTGCTCTTAAGTATCATCCTGATGTTAATAAAGAGGATAACGCTCAGGAGAAATTTATGAGGATAAAACATGCATACAATACGTTGCTAAATTCTAGTTCCCGCAAAAAATATGATTCTGGAAGTCGTGGTTATAATTCATCTCAAAGAAGCCAAAGTCGGAATCCACAAGCTGAAGAAGAATTTTATGGATTAGGAGACTTCTTTAAGGatcttcaagaagaattcagGAATTGGGAAGCCAGTGCAGCTTCACAAGGAAAGCCAAAGAGCCTATGGGAGGAATTGTCGGAAATAGGAGAAGAATTTGTGGAGTTTCTTGAGAAAGAACTCAATATTGTTGATGAAAATGGCAATCCTCAAGGCGGAAATCGATCTAATTTATACGAGACAGAGACACCAAGCAACAAGACTCAAGGCAACGCTAGCAAGGGAAACACAAGTGTTGAGGATAACCTTGATGAAATAGAAGCCACTCTAGCACAGTTAAAAAAGGAGCTAGGCTTATAG 816 0.3505 MHGLLLTNLSLLPNMLLSLHPTHRFLQPSSCFQCFQNQTNCSLSIPSCKISHKRFIHQHENKGRGSNRITFVVRAKRGESPYEVLGLSPSASVNEIKKAYRKLALKYHPDVNKEDNAQEKFMRIKHAYNTLLNSSSRKKYDSGSRGYNSSQRSQSRNPQAEEEFYGLGDFFKDLQEEFRNWEASAASQGKPKSLWEELSEIGEEFVEFLEKELNIVDENGNPQGGNRSNLYETETPSNKTQGNASKGNTSVEDNLDEIEATLAQLKKELGL 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05220 271 MobiDBLite consensus disorder prediction 135 160 - -
Tsu02g05220 271 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 47 269 - -
Tsu02g05220 271 SMART dnaj_3 79 136 IPR001623 -
Tsu02g05220 271 ProSitePatterns Nt-dnaJ domain signature. 121 140 IPR018253 -
Tsu02g05220 271 MobiDBLite consensus disorder prediction 219 255 - -
Tsu02g05220 271 Gene3D DnaJ domain 78 187 IPR036869 -
Tsu02g05220 271 PRINTS DnaJ domain signature 100 115 IPR001623 -
Tsu02g05220 271 PRINTS DnaJ domain signature 116 136 IPR001623 -
Tsu02g05220 271 PRINTS DnaJ domain signature 82 100 IPR001623 -
Tsu02g05220 271 Coils Coil 248 268 - -
Tsu02g05220 271 ProSiteProfiles dnaJ domain profile. 80 144 IPR001623 -
Tsu02g05220 271 MobiDBLite consensus disorder prediction 216 255 - -
Tsu02g05220 271 Pfam DnaJ domain 81 141 IPR001623 -
Tsu02g05220 271 CDD DnaJ 81 133 IPR001623 -
Tsu02g05220 271 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 47 269 - -
Tsu02g05220 271 SUPERFAMILY Chaperone J-domain 44 140 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05220 Tsu-Chr2 61122378 61125587 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05220 82 142 C2H2 Transcription Factor Family AT1G74250 41.791 1.38e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05220 - - mtr:MTR_2g097690 376.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05220 02 61122378 61125587 Tsu02g05220 02 61122378 61125587 ECH