Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05211 ATGCTTTCTCCGAGCACCTTTCTGCAAGATTTCTGTGTTCCTGACACAGTAAACCCGGTAACAAATGGATCTGAGTTGGaagattcatcatcatcaccttcTTCCGTCACAAGCTCAAATGGAGAATCCACAAAAGGGACAAGATATTCCAATTACATCCTCGGATACATAAGTGACATCCTCATGGATGAAGAAGATGACTTGGAGCTTAAACCTTGCATGTTGCAGGAATGTTTAAGACTCCAAGCTGCTGAAAAATCATTCTATGATGTGCTTGGTCACAACTATCCTAATTCATCATGTGAAGATTCCACCGACACAGATGGAAACGTCGGTCGTACTGCTAGTTTTGAGAGCAATAGCAGCAGCTGCTCCACTGATAACTCATACGAGTCTGATTGGGTCAACCATGTTGCTGAATTCGACCATTCTTCCTCACAACTACAAACCCCTGTAGTAGAAAAAAACTACTATAATGTGACAGAAGCTGCTAACAATATTCACAATGGAAGCTGGAATGCCATTCAGCCAGGGATGGGGGAAGAGTTTTCAGCTTCAGTAGTACCAAGAGAAAAGAGAAGTCATAAGATGAAATGTGATGATACTTGTAATGAACAAGAGGGAAGAGGTACCAAGCTTTCAGCTATCTTCTCTGATGAATTAGAGCCACCAGAGATCTTAGATGAGGTACTGCTTTGTCAGTCAGGAAGGACACAAAACCAACAAGCATCACAGAATGTCAATTCAGCAGGGAAGGCAAAGGGAACGGGTTCGCGTTCGAAGAAAGTATCTACTACTAAAAATGCCCTAGCTGTGGATTTGTGGACTATGCTAACTCAATGTGCGCAGGCTGTGGCAAGCTACGATCAAAGGAATACAAATGAGCTACTCAAGCAGATTAGGCAACATTCTTCGCCTTTCGGCGATGGACTCCAACGTTTAGCTTATTACTTTGCCGATGGTCTTGAGATAAGATTGGCTGCCGAGACGCCATCGTATAAGCCACTTGATCTGGCTACTGCAGGAGATATGTTGAAAGCTTACAAACTATTCATTACCTCGTCTCCTTTGCAGAGAATGACGAATATGTTGTTGACCAAAACGATTTTCAGACTAGTGAAGAACGAAGGCAGCATTCATATTATCGATTTTGGAATTTGCTATGGTTTCCAATGGCCTTGCCTCATCAAAAAACTTTCATTAAGACCCGGGGGTCCTCCAAAGCTTCGAATTACGGGAATTGATCTTCCTCAGGCAGGATTTAGGCCTGCAGAGAGGGTGGAGGAAACCGGACGACGTTTAGAAAACTACTGTAAAAAGTTCAATGTACCATTTGAATACAACTCCATTGCACAGAAATGGGAAACTATCCGGCTCGTGGATCTAAAGATAGACAGGAATGAAATAACAGTTGTTAGCTGTTTATACAGACTGAAGAACCTGTCTGATGAAACTGTAGCAGCGAATTGTCCTAGAGAAGCTTTGTTGAAGCTGATCAGGAAGATTAATCCAAAAATCTTCTTCCATGGTGTTGTCAATGGAAGTTATAGTGCACCGTTTTTTCTGACTCGGTTTAGGGAAGCACTATACCACTTCTCATCATTGTTTGATATGTTTGAGGCTAATGTGCCTCGTGAAGACACACAGAGGTTAATGCTTGAGAGAGAGTTGTTTGGAAGGGATGCCATAAATGTTATAGCTTGTGAGGGTGCAGAGAGAGTTGAAAGGCCTGAGACCTACAAGCAGTGGCAGCTCAGGAACAGGAGAGCCGGATTCAAACAAATCAGGTTCGATTCTGACTTGGTGAGTGAAACTAAAGCAATGGTGAAAAGTGAATACCATAAAGATTTTGCAGTTGATGAAGATGGTAAGTGGGTTTTGCACGGATGGAAGGGACGTGTTTTGAATGCTTTATCTGCTTGGGTTCCTACTTAA 1935 0.4217 MLSPSTFLQDFCVPDTVNPVTNGSELEDSSSSPSSVTSSNGESTKGTRYSNYILGYISDILMDEEDDLELKPCMLQECLRLQAAEKSFYDVLGHNYPNSSCEDSTDTDGNVGRTASFESNSSSCSTDNSYESDWVNHVAEFDHSSSQLQTPVVEKNYYNVTEAANNIHNGSWNAIQPGMGEEFSASVVPREKRSHKMKCDDTCNEQEGRGTKLSAIFSDELEPPEILDEVLLCQSGRTQNQQASQNVNSAGKAKGTGSRSKKVSTTKNALAVDLWTMLTQCAQAVASYDQRNTNELLKQIRQHSSPFGDGLQRLAYYFADGLEIRLAAETPSYKPLDLATAGDMLKAYKLFITSSPLQRMTNMLLTKTIFRLVKNEGSIHIIDFGICYGFQWPCLIKKLSLRPGGPPKLRITGIDLPQAGFRPAERVEETGRRLENYCKKFNVPFEYNSIAQKWETIRLVDLKIDRNEITVVSCLYRLKNLSDETVAANCPREALLKLIRKINPKIFFHGVVNGSYSAPFFLTRFREALYHFSSLFDMFEANVPREDTQRLMLERELFGRDAINVIACEGAERVERPETYKQWQLRNRRAGFKQIRFDSDLVSETKAMVKSEYHKDFAVDEDGKWVLHGWKGRVLNALSAWVPT 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05211 644 MobiDBLite consensus disorder prediction 241 262 - -
Tsu02g05211 644 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 8 643 IPR005202 -
Tsu02g05211 644 MobiDBLite consensus disorder prediction 18 44 - -
Tsu02g05211 644 ProSiteProfiles GRAS family profile. 265 642 IPR005202 -
Tsu02g05211 644 Pfam GRAS domain family 276 641 IPR005202 -
Tsu02g05211 644 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 8 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05211 Tsu-Chr2 61058658 61061024 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05211 49 643 GRAS Transcription Factor Family AT2G29060 44.231 8.12e-170 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tsu02g05211 GRAS 3.7e-107 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05211 - - cam:101504630 997.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05211 02 61058658 61061024 Tsu02g05211 02 61058658 61061024 ECH
Tsu02g05211 02 61058658 61061024 Tsu02g02114 02 20748249 20750640 PCT