Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05209 ATGCTTTCCACAAACACCTTTCTGCAAGATTTCAGTGTTCCTAACACAGTAACAAATGGATTTGAGTTGGaagattcatcttcatcacGTTCTTGTGACACATGCTCATATGGAGATTATGAACATACAAGATATTCCAACAGCATCCTCGGATACATAACTGACATCCTCATGgatgaagaatatgaattaGAGAACAAACCTTGTATGTTGCAGGAATGTTTAAGACTCCAAGCTGCTGAAAAATCATTCTATGATGTTCTTGGTCAAGACTATCCTAATTCATCATGTGATGATTCCACTGATCCAGATGGAAATTTCGGTCGCGCCGCTAGTTTTGAGAGCAAAAGCAGCAGCTGCACCACCACTGATAATTCATATGAGTCTGATTGGATCAACCTTGTTGGAGAATATGACTCTTCTTCCTTACAACTACAAACCCCTTTAATAGAACAAAACTACGCCGATTTGACAGAACCAGATCCAGTGGTAATTGAGCAACAATCTGCTAGCCATTTTCAGAATGGAACTTGGAGTTGGAATGACATTCAGCCAGTGATGGTTGAAGAGGTTTCAGCTTCATTAGCACCAAGAGAAAAGAGAAGTCATAAGATAAATGATGATGAATCTTGTGATGAACAAGAGGGAAGAGGTAGCAAGATTTCAGCTATCTTCTCTGATGAATTAGAGCCACCAGAGATTTTAGATGAGGTACTTCTTTATCAGTCAGGAAGgactcaacaacaacaacaatcgcAGAATCTCGATTCAGGAGGAAAGTCAAAGACAACACGTTCGCGGCCAAAGAAAGTATCTAATAACAATGCCACAGCTGTGGATTTGTGGACTATGCTAACTCAATGTGCGCAGGCTGTGGCGAGCTACGATCAAAGGAATACAAATGAGCTACTCAAGCAGATTAGGCAACATTCATCGGCTTGTGGTGATGGACTCCAGCGCTTAGCTCATTACTTTGCCAATGGTCTTGAGATAAGATTGGCTGCTGAGACACCGTCGTATATGCCGCTTTGTGTGGCAACAGCTGGAGATATGTTGAAAGCTTACAAACTATTCATTACCTCATCTCCTTTGCAGAGAATGACAAATACGCTGTTAACCAATACGATTATCAAACTAGTGAATAAGAACGAGAGAAGCGTCCATATTATCGATTTTGGAATTTGCTATGGTTTCCAATGGCCTTGCCTCATCAAAAGACTTTCATTAAGACCTGGTGGTCCTCCAAAGCTTCGAATGACAGGAATTGATCTTCCTCAGGCAGGCTTTAGGCCTGCAGAGAGGGTGGAGGAAACCGGACGGCGTTTAGAAAACTACTGCAAGAAGTTTAATGTACCATTTGAATACAACTGCATTGCACAGAAATGGGAAACTATCCGGCTCGAAGATCTGAAGCTAGACAGGAATGAAATAACAGTTGTTAGCTGTTTATACAGACTGAAGAACCTGCCTGATGAAACAATTGCAGTCAATTGTCCAAGAGAAGCTTTGTTGAAGCTGATCAGGAAGATTAATCCAACAATCTTCTTCCACGGTGTTATCAATGGAAGTTATAGTGCACCGTTTTTCCTGACTCGGTTTAGGGAAGCACTATACCACTTCTCATCATTGTTTGATATGTTTGAGGCTAATGTGCCTCGCGAAGATCCACAAAGGTTGGTGTTTGAGAGTGGATTGCTCGGTAGGGATGCCATAAATGTTATAGCTTGTGAGGGTGCAGAGAGAGTTGAAAGGCCTGAGACCTACAAGCAATGGCAGATCAGGAACAGAAGAGCTGGGTTTAAGCAAATCAGGTTGGATTCAGAGTTAGTGAGTGAAACCAAAACAATGGTGAAGAAGGAATACCATAAAGATTTTGTAGTTGATGAGGATGGTAAGTGGATTTTACAAGGATGGAAAGGGCGTATTTTGAATGCTTTCTCTGCTTGGGTTCCTGCTTAA 1959 0.4053 MLSTNTFLQDFSVPNTVTNGFELEDSSSSRSCDTCSYGDYEHTRYSNSILGYITDILMDEEYELENKPCMLQECLRLQAAEKSFYDVLGQDYPNSSCDDSTDPDGNFGRAASFESKSSSCTTTDNSYESDWINLVGEYDSSSLQLQTPLIEQNYADLTEPDPVVIEQQSASHFQNGTWSWNDIQPVMVEEVSASLAPREKRSHKINDDESCDEQEGRGSKISAIFSDELEPPEILDEVLLYQSGRTQQQQQSQNLDSGGKSKTTRSRPKKVSNNNATAVDLWTMLTQCAQAVASYDQRNTNELLKQIRQHSSACGDGLQRLAHYFANGLEIRLAAETPSYMPLCVATAGDMLKAYKLFITSSPLQRMTNTLLTNTIIKLVNKNERSVHIIDFGICYGFQWPCLIKRLSLRPGGPPKLRMTGIDLPQAGFRPAERVEETGRRLENYCKKFNVPFEYNCIAQKWETIRLEDLKLDRNEITVVSCLYRLKNLPDETIAVNCPREALLKLIRKINPTIFFHGVINGSYSAPFFLTRFREALYHFSSLFDMFEANVPREDPQRLVFESGLLGRDAINVIACEGAERVERPETYKQWQIRNRRAGFKQIRLDSELVSETKTMVKKEYHKDFVVDEDGKWILQGWKGRILNAFSAWVPA 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05209 652 ProSiteProfiles GRAS family profile. 272 650 IPR005202 -
Tsu02g05209 652 MobiDBLite consensus disorder prediction 245 261 - -
Tsu02g05209 652 MobiDBLite consensus disorder prediction 194 218 - -
Tsu02g05209 652 MobiDBLite consensus disorder prediction 245 273 - -
Tsu02g05209 652 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 15 651 - -
Tsu02g05209 652 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 651 IPR005202 -
Tsu02g05209 652 MobiDBLite consensus disorder prediction 194 216 - -
Tsu02g05209 652 Pfam GRAS domain family 283 649 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05209 Tsu-Chr2 61051701 61054313 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05209 45 651 GRAS Transcription Factor Family AT2G29060 45.411 1.05e-173 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tsu02g05209 GRAS 1.9e-104 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05209 - - cam:101504630 1017.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05209 02 61051701 61054313 Tsu02g05209 02 61051701 61054313 ECH
Tsu02g05209 02 61051701 61054313 Tsu02g02112 02 20735096 20741560 ECH
Tsu02g05209 02 61051701 61054313 Tsu02g02112 02 20735096 20741560 PCT