Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05208 ATGGATCCAAACTTCTTAGGATTTGAAACAACCTTCGAAATCGACGATTATGGTAACATTCTCTTCCTTTCTGACCAAAATCCAACCATTAATGATAATGATCCTTATTTCTATCCACCACCCTATGTGGTGGACCCACCACCACCTAGTTACTCGGAGGAACCACTCGTTTCCACTGATCCTTCTTTTGAAGACAATGATTTTTCAGAAACAGTTAAATACATAAGCCAAATTCTAATGGAAGAAGATTTTCAACAAAAACCATGTATGTGTTATGACCCAATTACCCTTCAACATACTGAGAAAATTTTCTTTGATGCTTTGGAATCAAAATCACCTCTTTCACCTAATCAACACCCTCTTGATGTTCTTCAGATTCCTATTCCTAGTTCATCTACTGATTCTTCTGGTAACAGTTCTTGTTCTAATGAATTGTTGAAGCCTCTTTCACCTGATACACCTGTTTCAGGTAGTACtgattctggttttagttcTATTTCAAGTGTTAAATCTCAGTTTATTGTTCCTAAACATGGTTTGAATAGTAATAATGATAGTATTAGTGATGgtgttttggatttggattcttcTGAGACTAAGGTTTTGGCTCAGAATATTTTTAGTGATGTTGATTCTATGTTGCAGTTTAGAAAAGGTTTAGAGGAAGCTAGTAAGTTTCTTCCTCAAAAAGCTCAGCTTTTTACTGGTTTGGAGAATTCTAGTAGTAATAGTTTGGTGTCTCGAGAGTCTAAGGAAAGGGTTGAAGCGATTAAGATGGAGGGTAGTGTTAGGGAAAGTTCCAATTCGAGTTATTCGAATTCGAGTAATTCAGTTTCGAGTTATTCGAATTCGAGTTCACATGGTTTGTTGAAAAGTAGAAAGAATCATGAGCGCCAAGGtagtgaagatgaagaaggaagAAGTAATAAACAGTCTGCAGTTTGTGTTGAGGAGAGTGAAATAACTGAGATGTTTGATAGGGTTTTGCTTAGTGTCGAAAATGTGCCGTTGTGTGCTGAGAACAAGGATGGATCGGTGGTGGATAGTAGCGGAAAGGTTGGTGAACCTGATGGAAGAGGGAAAGCGCGTTCCAAGAAACCAGGGAAGAAGAGGGAAACTGTGGATTTGAGGACCCTTTTGGTTCTTTGTGCACAAGCTGTGTCTGCTAATGACAATAGGACTGCAAATGAATTGTTAAAGCAGATTAGGCAGCATTCTTCTCATTTAGGTGATGCGTCACAGAGGTTGGCGCATTACTTTGCAAACGCGCTCGAAGCGCGCATGGTTGGTGCTGGTACCGGTacacaaatattatatatgagcCAGAAGATGATTAGTGCTGCTGATTTCTTGAAAGCATACCAAGTTTTTATATCTGTTtgcccttttaaaaaaattgcacatTTCTTTgcaaataaaatgattttgaaaacaGCAGAAAAGGCAAAAACGCTTCACATTATTGATTTTGGTATCTTATATGGTTTCCAGTGGCCAATTCTTATCAAGTTTTTATCAAAAAGAGATGGTGGACCTCCCAAGCTACGCATCACCGGAATTGAGTATCCCCAAGCTGGCTTTCGACCGGCTGAAAGAATCGAGGAAACTGGCCGGCGTCTAGCTAACTATTGTCAGCGTTTCAATGTTTCATTTGAATACAAGGCCATACCATCGCGACACTGGGAAACCATTCAAATTAAAGACCTTAATATTAAGAGCGACGAGGTAGTTGCTGTGAACTGTCTGATAAGGTTTAAGAATTTACATGATGAGACAATTGAAGTAAAAAGTCCCAAAGATGCAGTTCTGAAGTTAATCAGGAAGATAAATCCGAGTATATTTGTTCAATCCATAGTAAATGGAACTTATAATGCACCTTTCTTTTCCACGCGCTTCAAGGAGTCGCTTTTCCATTATTCTGCAACGTATGATATGTATGATACTCTCGTATCCCGTGAAAATGAATGGAGGTTGATGATCGAGAGAGAGTTTTTGGGTCGGGAGATTATGAATGTCATAGCATGTGAAGGTTTAGAGAGGGTTGAGAGGCCTGAGACTTATAAACAGTGGCAGGTTAGGAATCTTAGGGCTGGTTTTAGACAGCTCCCACTGGACAAGGAGATAATGGACAACTTTAGAGGTAAGCTGAGAGCATGGTACCACAAagattttgtctttgatgaagaTAACAACTGGATGCTTCAAGGTTGGAAAGGCCGCATTTTGTATGGTTCGGCTTGTTGGGTGCCAGCATAA 2256 0.3737 MDPNFLGFETTFEIDDYGNILFLSDQNPTINDNDPYFYPPPYVVDPPPPSYSEEPLVSTDPSFEDNDFSETVKYISQILMEEDFQQKPCMCYDPITLQHTEKIFFDALESKSPLSPNQHPLDVLQIPIPSSSTDSSGNSSCSNELLKPLSPDTPVSGSTDSGFSSISSVKSQFIVPKHGLNSNNDSISDGVLDLDSSETKVLAQNIFSDVDSMLQFRKGLEEASKFLPQKAQLFTGLENSSSNSLVSRESKERVEAIKMEGSVRESSNSSYSNSSNSVSSYSNSSSHGLLKSRKNHERQGSEDEEGRSNKQSAVCVEESEITEMFDRVLLSVENVPLCAENKDGSVVDSSGKVGEPDGRGKARSKKPGKKRETVDLRTLLVLCAQAVSANDNRTANELLKQIRQHSSHLGDASQRLAHYFANALEARMVGAGTGTQILYMSQKMISAADFLKAYQVFISVCPFKKIAHFFANKMILKTAEKAKTLHIIDFGILYGFQWPILIKFLSKRDGGPPKLRITGIEYPQAGFRPAERIEETGRRLANYCQRFNVSFEYKAIPSRHWETIQIKDLNIKSDEVVAVNCLIRFKNLHDETIEVKSPKDAVLKLIRKINPSIFVQSIVNGTYNAPFFSTRFKESLFHYSATYDMYDTLVSRENEWRLMIEREFLGREIMNVIACEGLERVERPETYKQWQVRNLRAGFRQLPLDKEIMDNFRGKLRAWYHKDFVFDEDNNWMLQGWKGRILYGSACWVPA 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05208 751 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 52 750 IPR005202 -
Tsu02g05208 751 ProSiteProfiles GRAS family profile. 367 749 IPR005202 -
Tsu02g05208 751 PANTHER SCARECROW-LIKE PROTEIN 34 52 750 - -
Tsu02g05208 751 Pfam GRAS domain family 376 748 IPR005202 -
Tsu02g05208 751 MobiDBLite consensus disorder prediction 354 371 - -
Tsu02g05208 751 MobiDBLite consensus disorder prediction 341 371 - -
Tsu02g05208 751 MobiDBLite consensus disorder prediction 259 314 - -
Tsu02g05208 751 MobiDBLite consensus disorder prediction 290 311 - -
Tsu02g05208 751 MobiDBLite consensus disorder prediction 116 161 - -
Tsu02g05208 751 MobiDBLite consensus disorder prediction 262 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05208 Tsu-Chr2 61042971 61046173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05208 71 751 GRAS Transcription Factor Family AT1G07530 49.300 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tsu02g05208 GRAS 8.4e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05208 - - cam:101504630 1118.99