Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05207 ATGGAGAACGATTTCGAAGGTGGCGAATGGCGTGGTGGTAAGCCAAGAGAGAAACGACATCAAACTAAAGAGGATGTTCTCTATGGAGTTTTTGCGGATTCTGAAGATGATGATCATGATCATGAGTATTCGAGTAGAAAGCGAAGAAAATACCGTGATTTTTCGAATAAACCGGTGAATTTTGTTTCTGCTGGAAATTTTATGCCTAATCAAGATAATGTTGATGagaatttaaaacaaaaagatgaGAATTTTGGTTCTCATAGGAATGATGAATCTGATGAGAATGATAATGGTAATGATAACTTTTTGCCTACGGAGTTTGGGAAAAAGATTAAGGAGGGAGCAATGAGGAGGGAGAAGGAGAGATTGGAGAAGAAGAATAAGCAGAAGCCTGGTCTAGGTCAGGAGGGATCTGTGAATTTTGGGACTTTCGAGAATTATACAAAAGGAATTGGAACAAAGCTGCTGGCGAAGATGGGTTATAAAGGTGGCGGTCTTGGGAAGAATGAGCAGGGTATGTTGAATCCTATTGAGGCAAAATTAAGGGCTAAGAAACTTGGTCTTGGAATTAATGAATCGAAGACTACTACAATGTCGTTGCCTGCTTTGCAGACGGAAAAGAAGAATGCACCGGTAGGAGATGTGCAGCCTACAGTTGGAAGATTGAGAGAACGTTTGTGGTTAAAGCagttaaagaagaagaagaagaaaaaagaagagtatGTAACTGCTGAAGAGTTGTTAGCGAGCAAGCAAGAAGAAGAATCGGAGGTTGTTCAGAAGATTTATGATATGCGGGGGCCCCAGATACGCGTGTATACAAATTTGTCTGATTTGAATGCTGAGGAGAAAGCAAAGGAAGATGTCCCAATGCCTGAGCTTCAGTATATCGTAGCACGAATAGTTTGGTTTTCTGAGGGTGACATCCATGAGATTAACAGAGATTTGAGGAAAGAGAGGGATATTGCACTTAgcttgataaaagaaaaaaagaacttGGAAGCTGAGGCATCATTTCAAAAGAATCAGCTGGATAATTATGAGAAAATAATGAATGTGCTGGACCGAGTTGAAGAAGAGAACACCTTAGGAACATTAACATTGGAATTGGACTCTCTTGCTCAATGCTTTAGAGACATGCACAAAAGATATCCTGAGGACTATAAGTTGTGTAACTTGTCATGCATTGCTTGTTCATATGCTCTACCTTTGTTTATCAGAGTGTTCCAAGAATGGGATCCTCTTCGAAATCCTTCTCACGGTTTGGAGTTGGTATCACAGTGGAAGGAATTGCTTCAAGGTGATGATTGTTTTGATATTTGGGACACTTCACCTTATACTCACTTGGTTTCAAAGGTTGTATTACCAGCTGTTAGAATATCTGGTATCAATACCTGGCATGCACGGGATCCTGAGCCGATGCTAAGGTTTTTTGAGTCATGGGAAAAATTGCTTCCTTCTTCAGTTCTAGCTGAAATATTGGACCACATAGTCATGCCAATACTATCAAGTGCAGTAGGTACTTGGGAACCACATCTTGAGACCATTCCTATCCACACATGGGTGCATCCATGGCTATCTTTGCTAGGGCACAAATTGGAGGGTATCTACAAGACGATTCGTTCCAAATTGAGTACTGTTCTTGAGGTGTGGCATCCAAGGGATGGTTCTGCATATGCCATATTGTCCCCTTGGAAGACTGTGTTTGATTCTGATAGTTGGCAACAACTTATGCACCGTTCTATTGTACCAAAGCTGACGGCTGTATTTGTATCTGATGACTTTGAAGTGAACCCGGCAAGTCAGAAACTTGATCAGTTTTATTGGGTAATGAACTGGGCTTCAGTTATCCCAGCTCATCTGATGGTTGACACGATGGAGATCTTCTTTACCAAGTGGCTTACAGTTTTGTATCATTGGTTGTGCTCAAATCCTAACtttaatgaagttttgaaaTGGTTTTTGGGCTGGAAAGAACTTATTCCAAAAGAACTTTTGGCAAATAAACGTATTCGAGACATGCTCAATTGCGGTCTTGATATGATGAATCAGGCTGCTGAAGGTATGGAGGTTGTGCAATTCAAACCAAAGATAAGCTATATCAGAGTACCCGAGCAGAGGAAATTTGAGACTCATCAGAAAGCAGCAGCCTATATCAGTGCAGATGGTGCGAATGAAATGAGCGTGAAAGAAATCATTGAAGCTTATGCTCGGGATCATGGTTTACTGTTCAAACTTAAACCTGGTAGAATGCATGATGGCCATCAAATATATGGGTTTGGCAATGTCAGCATAATAATTGATTCTCTAAATCAAAAGGTCTATGCCCTAAATGAGGAGACATGGTCTTTAGAAACTCTTGGGCGATTGCTAGAGTTACATAATAGATCTCTTAGTAAACGACGCTGA 2412 0.3951 MENDFEGGEWRGGKPREKRHQTKEDVLYGVFADSEDDDHDHEYSSRKRRKYRDFSNKPVNFVSAGNFMPNQDNVDENLKQKDENFGSHRNDESDENDNGNDNFLPTEFGKKIKEGAMRREKERLEKKNKQKPGLGQEGSVNFGTFENYTKGIGTKLLAKMGYKGGGLGKNEQGMLNPIEAKLRAKKLGLGINESKTTTMSLPALQTEKKNAPVGDVQPTVGRLRERLWLKQLKKKKKKKEEYVTAEELLASKQEEESEVVQKIYDMRGPQIRVYTNLSDLNAEEKAKEDVPMPELQYIVARIVWFSEGDIHEINRDLRKERDIALSLIKEKKNLEAEASFQKNQLDNYEKIMNVLDRVEEENTLGTLTLELDSLAQCFRDMHKRYPEDYKLCNLSCIACSYALPLFIRVFQEWDPLRNPSHGLELVSQWKELLQGDDCFDIWDTSPYTHLVSKVVLPAVRISGINTWHARDPEPMLRFFESWEKLLPSSVLAEILDHIVMPILSSAVGTWEPHLETIPIHTWVHPWLSLLGHKLEGIYKTIRSKLSTVLEVWHPRDGSAYAILSPWKTVFDSDSWQQLMHRSIVPKLTAVFVSDDFEVNPASQKLDQFYWVMNWASVIPAHLMVDTMEIFFTKWLTVLYHWLCSNPNFNEVLKWFLGWKELIPKELLANKRIRDMLNCGLDMMNQAAEGMEVVQFKPKISYIRVPEQRKFETHQKAAAYISADGANEMSVKEIIEAYARDHGLLFKLKPGRMHDGHQIYGFGNVSIIIDSLNQKVYALNEETWSLETLGRLLELHNRSLSKRR 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05207 803 MobiDBLite consensus disorder prediction 107 132 - -
Tsu02g05207 803 Pfam GC-rich sequence DNA-binding factor-like protein 371 638 IPR022783 -
Tsu02g05207 803 SMART G-patch_5 147 192 IPR000467 GO:0003676
Tsu02g05207 803 Coils Coil 110 130 - -
Tsu02g05207 803 PIRSF TFIP11 6 798 IPR024933 -
Tsu02g05207 803 Coils Coil 235 255 - -
Tsu02g05207 803 Pfam G-patch domain 149 191 IPR000467 GO:0003676
Tsu02g05207 803 Pfam Tuftelin interacting protein N terminal 7 95 IPR022159 -
Tsu02g05207 803 Coils Coil 317 361 - -
Tsu02g05207 803 ProSiteProfiles G-patch domain profile. 149 194 IPR000467 GO:0003676
Tsu02g05207 803 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 1 788 IPR045211 GO:0000390
Tsu02g05207 803 PANTHER TUFTELIN-INTERACTING PROTEIN 11 1 788 - -
Tsu02g05207 803 MobiDBLite consensus disorder prediction 82 138 - -
Tsu02g05207 803 MobiDBLite consensus disorder prediction 1 54 - -
Tsu02g05207 803 MobiDBLite consensus disorder prediction 1 49 - -
Tsu02g05207 803 MobiDBLite consensus disorder prediction 82 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05207 Tsu-Chr2 61034368 61036779 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05207 152 193 C2H2 Transcription Factor Family AT5G26610 54.762 4.39e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05207 K13103 - gmx:100781621 1082.01