Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05190 ATGGGAAAACAGTTGATTAAATCAGAGGAATCCACTCAAATTCATGAAGTTAATCAAGGATGCATGTGGGGCATGTTTAATATTCTTGATTACCATCAATGGGGTGTCAAAAGGGTGTTTcatcataaaaagaaaagacatGACAGATATAAGAGAAAGACCACTTTGCAAGAGCAACAAAATGTAGTTGCAGAAGCAGAATCTCAATTGGTTAGTCAACATAGAGAAATATCAAATGCTAAAGGTCAAACTAGTAGTGAGAATGCACTTCATCAGAAGAAAGATGGAAATACAACAGAAAGTTCTCTTAATAGAGacatttcaattaaatttaagaACAATGATGATGTTTTGGAGATAATTAGTGTGGAGAAGAATTTGTTACTCAAATTTCTAAAAGATATAGACTTTGGTGGTAAAAGAAATCATAAAGCTTCCCACAACAAAGCGAGATTGACAAAATCGGGATCATTTCCTTTACCTGTGTCTTCTAAGACGAAAAACATTAGCTCTAGTACCTTCCGAGCCAAGCAAACCGAAATTTGGGACTTCCCTAAAGGAGAAAAGTTGCGTGCCGGCACTCAGGTACCGAAAAAGTTTGGATCAAGTTCAGTGAAAGATATTTTGTATGAAACGCTGAAGCCTTCTCGGACTGATAATGGAATTGATAGTGTCGTTACCGTGGAACAAAAATCAAGCAGTTCTTCGAGGTCTTCTGAAGGATTAAACCACAAAGGATGGAATCAAGTGGTTATTCATCAATTCAAAGTTATAAAACAGAAGATAAAACATGCAATTGTGGAATTGAAAAAAAGTGGTCACAATAAAGCTTCACCTGAATACAGCATCATTGGTAATGAGAAAGAGATCTCACAAAGCTTAGCCGATGGCACGATTCATGAATACAGAAAGAGTAAAAGCTTGAGCGAGACTAAAGCTTCTGAATCTGGTTCCAACAAACACGAACCTCAACTAATGCGAAGAACATCTTCTCTTAACGAATCGATGGATAGATATACTCAGTTGTTTGAGAAAAGTTTAAGCAAAGAGGTTAAGTGGCAAAGCTCAAAGTCTAAAAGTTTAAGATTGACAAATGACGATAAGACTCAAAAGAGTGGGCATGCTCGTATGTTCTCCAGAAGCAATTTGTCGATGCCTAATCTCGAGGCATTAGGATTCATTCTACATGAAGCTCTTCTTGAAACAAATGATATGGGAAATAACACAGTGGAAAGTGATAATGATGTTCAAAGTAAATCTGCGAGCATTCCTTTAAAGAACGATGAATCAACTGATCATTTTAAAGAGGCTGAAATTGATGAAACAGTTGAAGGAAGTGACAGAGATGTGAATCCTAGTCCTCGTTCTTTATCTGATAAGACGGTGGAGAAAATTGACGAAGGAGTTGCCTTTGACCAAAGGGAGGACATACATGAGGCAGCATCGGAACAAGAAGGAAAAGAATCGAATACACGAGGCTCAAATGCTAGTGTAACAGTCGTCGAAGACACAAACAAGAGTCTTGAAAATGATATCTTGCACTTCAAGTCATATTCAGAAACCGATTCCAATTTCAAATATGTGAAAGATATTCTTGAATATTCAGGTTTCACAAGAAATGAGCAGACCCAAATGCGATACACGGTAGACCAGCCAATAAAACCATCGTTATTCACAGCTTTGGAAGAATCTTTGCTTCATGAGAATGATGAAAACGAGTATTCCGGAGAAGAGAATAACAACAATTGTGATCGCCAACTTCTATTTAACTTGATTAACGAGGTACTCTTTCAAATGTATGAAAAGTCACCAACTTACTTTCCGAAACCCTTCGCCTTCAACTATAAACTCAAATCAATGCCTAAAGGGAACTATCTTGTTAATGAAGTATGGAACAATGTTAGTTCATATTTGACTTTGAGACCAGAATTAGATGAGACATTAGATGATGTTGTCGGTCGTGATTTGGCAAAGGGAACCGGTTGGATGAATCTTCAACAGGAAGAGGAATGTGTAGCACTTGAACTAGAGGAAATGATCATAGATGATTTATTAGATGAAATTATCTTCTCTTGA 2076 0.3651 MGKQLIKSEESTQIHEVNQGCMWGMFNILDYHQWGVKRVFHHKKKRHDRYKRKTTLQEQQNVVAEAESQLVSQHREISNAKGQTSSENALHQKKDGNTTESSLNRDISIKFKNNDDVLEIISVEKNLLLKFLKDIDFGGKRNHKASHNKARLTKSGSFPLPVSSKTKNISSSTFRAKQTEIWDFPKGEKLRAGTQVPKKFGSSSVKDILYETLKPSRTDNGIDSVVTVEQKSSSSSRSSEGLNHKGWNQVVIHQFKVIKQKIKHAIVELKKSGHNKASPEYSIIGNEKEISQSLADGTIHEYRKSKSLSETKASESGSNKHEPQLMRRTSSLNESMDRYTQLFEKSLSKEVKWQSSKSKSLRLTNDDKTQKSGHARMFSRSNLSMPNLEALGFILHEALLETNDMGNNTVESDNDVQSKSASIPLKNDESTDHFKEAEIDETVEGSDRDVNPSPRSLSDKTVEKIDEGVAFDQREDIHEAASEQEGKESNTRGSNASVTVVEDTNKSLENDILHFKSYSETDSNFKYVKDILEYSGFTRNEQTQMRYTVDQPIKPSLFTALEESLLHENDENEYSGEENNNNCDRQLLFNLINEVLFQMYEKSPTYFPKPFAFNYKLKSMPKGNYLVNEVWNNVSSYLTLRPELDETLDDVVGRDLAKGTGWMNLQQEEECVALELEEMIIDDLLDEIIFS 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05190 691 MobiDBLite consensus disorder prediction 76 102 - -
Tsu02g05190 691 MobiDBLite consensus disorder prediction 304 329 - -
Tsu02g05190 691 Coils Coil 56 83 - -
Tsu02g05190 691 PANTHER PROTEIN TRM32 75 691 IPR044257 -
Tsu02g05190 691 MobiDBLite consensus disorder prediction 405 425 - -
Tsu02g05190 691 PANTHER PROTEIN TRM32 75 691 - -
Tsu02g05190 691 MobiDBLite consensus disorder prediction 405 463 - -
Tsu02g05190 691 MobiDBLite consensus disorder prediction 354 375 - -
Tsu02g05190 691 MobiDBLite consensus disorder prediction 354 374 - -
Tsu02g05190 691 PANTHER PROTEIN TRM32 1 89 - -
Tsu02g05190 691 MobiDBLite consensus disorder prediction 426 448 - -
Tsu02g05190 691 PANTHER PROTEIN TRM32 1 89 IPR044257 -
Tsu02g05190 691 MobiDBLite consensus disorder prediction 311 329 - -
Tsu02g05190 691 Pfam Domain of unknown function (DUF4378) 525 687 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05190 Tsu-Chr2 60899775 60903579 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05190 116 681 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 29.210 2.06e-47 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05190 - - mtr:MTR_2g096870 920.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05190 02 60899775 60903579 Tsu02g05190 02 60899775 60903579 ECH