Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05184 ATGGTTTTCTCTTCTATTCCATCTTATTTAGATCCTCTCAATTGGCAGCAAcAACCAAATCAACATCAGTTGCTTCCACCACTATCCTCACAGCCACATGGTGCTGGCTCAATAATCAGGCCCGGTTCGTTACAAGATCAAGCTCAATCTCAGGAAGTTCAAACAGGTCAAACTCAGGCTCAGCAAGCTAAGTTACCACCACCTTCCGAAACAGCTTTAAAGTGTCCTCGTTGTGAATCGACCAACACAAAATTTTGTTACTACAACAACTATAACTTGTCTCAACCAAGACACTTTTGCAAGACATGTAGGCGTTATTGGACGAGAGGGGGTGCGTTAAGAAATGTTCCTGTTGGTGGAGGGTGTCGTAGAAGCAAAAAGACCAAAAAAAGTACTACTACTGCTTCTACTACTACTCCCTCCAAATCTCCTAATGATAAAGAATATTCAACAAGTGCAATTCATTCAACTACTTCAAACCCTCATGGTGATCAATTTTTACATTCAACTAGCAGAAATTACTTGAACATGTCATCACTTCAGAATCTAAACCGGTTTGGTGTTGGAAACATGTTTCAAATTGGAGATTATAACTCAAATACCGGTGGTGGAGAAGGCGGAGTTGTGGATCAGTGGCGGTTTCAACAATTTCCTTTCATGAATAATGGTTTTGAGTCAAGTTCAAATGTTTCTTTCCCATTTCAAAGTGAAATTATTGAACCACAAACTTCTTCTAGGGTTACTACTCAGATGCCTACATCGGTTAAATCGGAATACAACGGAGGTTTGAATTTGCTAAGATCTCCTCTTAGCTTCTCACAAAATAACAACCATTACAACAATTCATCATGGACTGATATTTCTGGTCTTGCAACTTCTCCCGCTAGTCGTCTCATGTAA 900 0.3967 MVFSSIPSYLDPLNWQQQPNQHQLLPPLSSQPHGAGSIIRPGSLQDQAQSQEVQTGQTQAQQAKLPPPSETALKCPRCESTNTKFCYYNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRSKKTKKSTTTASTTTPSKSPNDKEYSTSAIHSTTSNPHGDQFLHSTSRNYLNMSSLQNLNRFGVGNMFQIGDYNSNTGGGEGGVVDQWRFQQFPFMNNGFESSSNVSFPFQSEIIEPQTSSRVTTQMPTSVKSEYNGGLNLLRSPLSFSQNNNHYNNSSWTDISGLATSPASRLM 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05184 299 ProSitePatterns Zinc finger Dof-type signature. 75 111 IPR003851 GO:0003677|GO:0006355
Tsu02g05184 299 MobiDBLite consensus disorder prediction 131 167 - -
Tsu02g05184 299 MobiDBLite consensus disorder prediction 117 167 - -
Tsu02g05184 299 ProSiteProfiles Zinc finger Dof-type profile. 73 127 IPR003851 GO:0003677|GO:0006355
Tsu02g05184 299 MobiDBLite consensus disorder prediction 42 66 - -
Tsu02g05184 299 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 26 295 - -
Tsu02g05184 299 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 26 295 IPR045174 GO:0003700|GO:0006355
Tsu02g05184 299 MobiDBLite consensus disorder prediction 20 71 - -
Tsu02g05184 299 Pfam Dof domain, zinc finger 72 127 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05184 Tsu-Chr2 60833570 60835253 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05184 1 293 C2C2-Dof Transcription Factor Family AT2G37590 36.888 4.80e-44 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Tsu02g05184 zf-Dof 9.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05184 - - cam:101511165 322.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05184 02 60833570 60835253 Tsu02g05184 02 60833570 60835253 ECH
Tsu02g05184 02 60833570 60835253 Tsu02g02087 02 20363085 20364534 PCT