Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05181 ATGGCGCTGGTGGATCATCCAAATGTGTTGAAATCACATTGTTCCTTCTTGGGAGAATTTGGGGGGAAACAAGTTCTTTGGGTTGTGATGCCATTCATGGCAGAGGGTTCGTGTCTTCACATATTGAAAGCTGCACATCTTGATGGCTTTGATGAAGTTTATATTGCAGCTGTTCTTGTGGAGGTGTTGAAGGGTTTACAATACCTTCACCACCATGGTTATGTCCACCGTGATGTTAAGGCTGGAAACATTCTCATTGACAGTGACGGTGCTGTTAAGCTCGGTGATTTCGGCATGTCTGCTTGCCTTTTTGATTCTCGTGATACATACTCCAGAAACACATTTGTCGCAACACCTTGCTGGATGGCACCTGAGGTCATTGACCTGGATCatggttataagttcaactctaTGAGGTACCTGTTAGCTTATGGAGTCAAGGCTTGA 447 0.4318 MALVDHPNVLKSHCSFLGEFGGKQVLWVVMPFMAEGSCLHILKAAHLDGFDEVYIAAVLVEVLKGLQYLHHHGYVHRDVKAGNILIDSDGAVKLGDFGMSACLFDSRDTYSRNTFVATPCWMAPEVIDLDHGYKFNSMRYLLAYGVKA 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05181 148 ProSiteProfiles Protein kinase domain profile. 1 148 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g05181 148 SUPERFAMILY Protein kinase-like (PK-like) 2 134 IPR011009 -
Tsu02g05181 148 ProSitePatterns Serine/Threonine protein kinases active-site signature. 74 86 IPR008271 GO:0004672|GO:0006468
Tsu02g05181 148 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 136 - -
Tsu02g05181 148 SMART serkin_6 1 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g05181 148 Pfam Protein kinase domain 2 133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g05181 148 Gene3D Transferase(Phosphotransferase) domain 1 1 141 - -
Tsu02g05181 148 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05181 Tsu-Chr2 60805657 60806186 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05181 1 137 MAP Kinase Kinase Kinase Kinase AT1G79640 67.391 1.04e-63 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Tsu02g05181 Pkinase 3.8e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05181 K08835 - gmx:100780339 211.846