Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05154 atgtcaaaacctagaaacttctttttcttcaaacaatcaccaccaccaccccaATTACCACCTTCCTCACCTCGCAACAAAACCTTCTCCGACGCAATTATCGACGAAAACATCGAAACCGCACACTGTCTAATAACAAAATGGAACTCTATTTCCACAACTTCAAACCATTCTTATCTTTTCAACAACACTGAAGAAGCCAAACACTACCTTAAAGCCGTTAAAAGTCTACAATCTGCTATGCAGTACCTCGTAGCACAGGATTCCACCTCCAAGAAACTCATTGCAGCACAATCGTTAATGCAGCTTGCTATGAAGAATCTCGAAACAGAATTTTGTCGAATTTTAGGACAAAATAGAGACCGGTTCAACTCTGAATCGGTCTCTGTTCGCTCCCGCACCTCTAGTGATCGACGGAGTAGTTTCTCCGACGATGAATTCTCTGATGAAGATTCGTCATCGCTCTCAGCTGAATCAGTATCAATGACTGTTATAGCTGATTTAAAAGCTATTGCTGAATGTATGATATTCACCGGTTATAGCAAAGAGTGTGCTAAGCTTTACGTAATTGTGAGAAAATCTATTGTTGATGAAGCACTTTACAATCTCGGAGTTGAGAAACTGAGTTTCTCTCAGATTCAGAAAATGGATTGGGAAGTTCTTGAATGGAAGATTAAGACCTGGCTAAACGCCGTTAAAGTCGCTGTCAATACTCTGTTTCACGGCGAGAGAACACTCTGCGATTACATCTTTGAATCACCGGAGAAAAAAATCACCGATTCATGTTTCACTGAGATTTGCAAAGACGGTGCTATGATGCTGTTTTCTTTCCCGGAAAACGTTGCAAAATGCAAGAAAACGCCGGAGAAAATGTTCAGAACGTTGGATTTATACGAAGCGATTTCCGATAATTGGCAACAAATTGAATTGATCTTTTCATCGGAATCAAATTCCACGATCCGTTCTCAGGTGATTTCATCACAAGTAAGACTCGGTGAAACCGTTAGAACAATGCTAACCGATTTCGAATCGGCGATTCAGAAAGAATCTTCGAAAGTTCCAGTACCAGGCGGTGGAATTCATCCTCTAACACGCTACGTCATGAACTACATCGCACTTCTCTCCGATTACGGCGACGCAATCGCCGATATAGTTTTTGATTGGCCACAATCACCGTTACCGGAATCTTACTACAAAAATCCATCTCACGATGAGAATAATCCACCGTCGGAGATAGCAAAACGGTTATCGTGGCTAATTCTTGTTGTTCTCTGTAAACTCGACGGAAAAGCTGAACTATACAAAGACGTTGCACTTTCGTATCTTTTTCTTGCGAATAACATGCAATACGTCGTCGTAAAAGTGCGGAAATCGAATCTAGGGTTCATTCTCGGTGAGGATTGGTTAATGAAACACGAAATGAAGGTGAAAGAGTATGTTACGAAATACGAACGCATGGCATGGAGTAAGGTTCTATCGTCGATTCCGGAGAATCCAACGGCGGACAATGTTAGTGGAATCTTTCAAAATTTCAACGTGGCGTTTGAAGAAGCTTTTAGAACACAGTATTTATGGGTCGTGCCCGACCCGAAAATGAGAGAGGAAATTGGAGCGTGGTTAGATGTGAATGTTGTTTACAAGTACAGGGAGTTCTATGTGAAATATCGGGTCGGGTTGAATTCGGTTATAAGATATTCGCCCGAAGATTTGAGGAATTATCTGTCGGAGATTTTGTGTGGTAGCGTTTCGTCGCATTCGCCGGATCGGTGA 1770 0.4062 MSKPRNFFFFKQSPPPPQLPPSSPRNKTFSDAIIDENIETAHCLITKWNSISTTSNHSYLFNNTEEAKHYLKAVKSLQSAMQYLVAQDSTSKKLIAAQSLMQLAMKNLETEFCRILGQNRDRFNSESVSVRSRTSSDRRSSFSDDEFSDEDSSSLSAESVSMTVIADLKAIAECMIFTGYSKECAKLYVIVRKSIVDEALYNLGVEKLSFSQIQKMDWEVLEWKIKTWLNAVKVAVNTLFHGERTLCDYIFESPEKKITDSCFTEICKDGAMMLFSFPENVAKCKKTPEKMFRTLDLYEAISDNWQQIELIFSSESNSTIRSQVISSQVRLGETVRTMLTDFESAIQKESSKVPVPGGGIHPLTRYVMNYIALLSDYGDAIADIVFDWPQSPLPESYYKNPSHDENNPPSEIAKRLSWLILVVLCKLDGKAELYKDVALSYLFLANNMQYVVVKVRKSNLGFILGEDWLMKHEMKVKEYVTKYERMAWSKVLSSIPENPTADNVSGIFQNFNVAFEEAFRTQYLWVVPDPKMREEIGAWLDVNVVYKYREFYVKYRVGLNSVIRYSPEDLRNYLSEILCGSVSSHSPDR 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05154 589 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 3 582 - -
Tsu02g05154 589 SUPERFAMILY Cullin repeat-like 55 577 IPR016159 -
Tsu02g05154 589 Pfam Exo70 exocyst complex subunit 227 576 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tsu02g05154 589 MobiDBLite consensus disorder prediction 127 152 - -
Tsu02g05154 589 Gene3D Exocyst complex component Exo70 44 586 - -
Tsu02g05154 589 PANTHER EXOCYST COMPLEX PROTEIN EXO70 3 582 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05154 Tsu-Chr2 60585717 60587575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05154 9 581 EXO70 exocyst subunit family AT5G59730 49.091 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05154 K07195 - gmx:100801773 719.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05154 02 60585717 60587575 Tsu02g05154 02 60585717 60587575 ECH