Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05146 ATGATGTTGGATTTGAGAAAACATGGTTTGTTTGTCTGTGTTTTGTATATGTTGTTACCCTTGTTATGCTTTTGTGCTACTTTTGTTCCATCTGATAATTACCTTATAGATTGTGGTTCAACTACAACTACTTCAGTTGGTAACAGAAATTTCACATCAGATAATTTTAATAAGAAGTTACTTTCAACTCAGCAAGAAATTCTTGCTAGTACTTCTTCAAAATCAGTTTCTTCTGATGCTGATGAATCACCTCTTTATCAAACTGCAAGAATTTTTACTGGATCTTCTAAGTATACTTTTCCAATTAATCAACAAGGGAGACACTGGATCCGGTTTTATTTCTTTCCATTTATTTATGATAGATACAATTTAAATGCTGCAAAATTCTCTGTTGCAACACAAACTTTTGTTCTTCTTAGTGGATTCACCGCCCCGAAGAATCCTGTTATGAAGGAATACTCTATCAATGTTACAACAGATACACTTGTGATTACTTTTAACCCCTTTGATAATTCAGTTGCATTTGTTAATGCTATTGAAGTTGTTTCTATGCCTGATGATCTCATTGTTAATGAAGCTAGTTCCTTAAGTCCAGCGTCGACTTATTCTGGATTAGTGAATCAGGCTTTGGAGACTGTTTGGAGGGTTAACATGGGTGGGCCGGTTGTTAGCTCCGGACAGGACCCTCTTCATAGAACTTGGGTTTCGGATCAAAAGTTTCTTCTACAATCGAGCCTTGCTAATGATTTTTCGAATGTTGCTGCTGTTGAGTATGTTTCTGGGGGGGCAACACAAAACACTGCTCCGTCTAGTGTTTATGGTACTGTCGCGCAGATGAACACAAGTGGTGATCCTAATGTTAATTTCAATGTGACATGGCAGTTTGATATGGAGGCTGGATTTCAGTACTTTGTGCGAGCTCATTTTTGTGATATAGTTAGTAAAGTTCTCAATGAACTTTACTTCAATGTTTATATTGACTCGTTGGCAGCTGCTAAGGATCTTGATCTTAGTTCTCAAAGTAATAATGTTTTGGCtgttccatattataaggattTGGTTACACCTTTAGCCGACAGCAATAAACTTCGTGTAAGTATTGGTCCTTCCACTTTGAATAAGGACAACCCTAATGCTATTTTGAATGGACTGGAGATAATGAAAATGAACAATTCTATAGGCAGTCTAAGTGCGGATGCGGCGTCTGGTGCTGGGGGTATTAGTTCTGGTTCGAGTTCTAGTAAGGTTGGTGTGATAGCTGGTGTGAGTGTTGGGATCGTGAGTGTATTGGTCTTGGCTGGAGTTTGTTGTGTACTGTGCAGGAAAAAGAAGAGGTTGGCAAGACAAAGGCAGTCAAAGACATGGATTCCTCTATCTGTCAACGATCAAACATCGCATACAATGGGAAGTAAGTATTCCAATGGCACTACAATAAGTGCTGCTTCAAACTTTGAGTACCGTGTCCCTTTTGCTGAAGTTCAGGAGGGTACAAACAATTTTGATGAGAGTTGGGTTATTGGGGTAGGCGGTTTCGGGAAAGTCTACAAGGGAGAATTAAGGGATGGCAGAAAAGTGGCGGTGAAGAGAGGGAATCCACGGTCGCAGCAGGGGATTGCTGAATTTAGAACTGAAATTGAAATGTTGTCTCAGTTTCGTCATCGTCATCTGGTGTCTTTGATTGGTTATTGtgatgaaaataatgaaatgatcCTTATATATGAATACATGGAGAAGGGAACTCTCAAGAGTCATCTATATGGTGGGGGATTCCCGAGCTTAAGTTGGAAGGAGAGACTTGAGATATGCATTGGATCTGCTAGAGGACTTCATTACCTTCACACCGGCTATTCTAAAGCAGTTATTCACCGTGACGTGAAGTCTGCAAATATCCTACTCGACGAGAACCTGATGGCTAAAGTTGCTGATTTCGGATTGTCAAAAACTGGTCCTGAGATCGATCAAACGCACGTGAGCACCGCTGTCAAGGGGAGTTTCGGGTACCTTGATCCAGAGTATTTCAGGAGGCAACAACTGACTGAAAAGTCAGACGTGTATTCCTTTGGCGTAGTTCTGTTTGAAGTTCTTTGTGCAAGGCCTGTCATAGATCCATCTCTTCCTAGGGAAATGGTAAACTTGGCAGAATGGGCGATGAAATTTCAGAAAAAAGGACAGTTGGAACAAATCATCGATAGAACGCTTGCAGGGAAAGTCAAACCAGATTCTCTTAGGAAATTTGGAGAAACTGCTGAGAAATGTTTGGCTGATTATGGTGTTGACAGGCCTTCAATGGGAGATGTCTTGTGGAATTTGGAGTATGCTCTTCAACTTCAAGAGGCTGTGGTTCAAGGCGATCCTGAAGATAACAGTACAAATATGATCGGCGAACTATCTCCTCAGGTCAACAATTTCAGCCAGGACGAGAATGTTTCATCTGCTTCTGCTGTACAGTTCGAAGCTTCAGCTGTCGATGATCTTTCCGGTGTTTCTATGAGTAGGGTATTCTCACAGTTGGTGAAGTCTGAGGGTAGATGA 2532 0.4036 MMLDLRKHGLFVCVLYMLLPLLCFCATFVPSDNYLIDCGSTTTTSVGNRNFTSDNFNKKLLSTQQEILASTSSKSVSSDADESPLYQTARIFTGSSKYTFPINQQGRHWIRFYFFPFIYDRYNLNAAKFSVATQTFVLLSGFTAPKNPVMKEYSINVTTDTLVITFNPFDNSVAFVNAIEVVSMPDDLIVNEASSLSPASTYSGLVNQALETVWRVNMGGPVVSSGQDPLHRTWVSDQKFLLQSSLANDFSNVAAVEYVSGGATQNTAPSSVYGTVAQMNTSGDPNVNFNVTWQFDMEAGFQYFVRAHFCDIVSKVLNELYFNVYIDSLAAAKDLDLSSQSNNVLAVPYYKDLVTPLADSNKLRVSIGPSTLNKDNPNAILNGLEIMKMNNSIGSLSADAASGAGGISSGSSSSKVGVIAGVSVGIVSVLVLAGVCCVLCRKKKRLARQRQSKTWIPLSVNDQTSHTMGSKYSNGTTISAASNFEYRVPFAEVQEGTNNFDESWVIGVGGFGKVYKGELRDGRKVAVKRGNPRSQQGIAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILIYEYMEKGTLKSHLYGGGFPSLSWKERLEICIGSARGLHYLHTGYSKAVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPSLPREMVNLAEWAMKFQKKGQLEQIIDRTLAGKVKPDSLRKFGETAEKCLADYGVDRPSMGDVLWNLEYALQLQEAVVQGDPEDNSTNMIGELSPQVNNFSQDENVSSASAVQFEASAVDDLSGVSMSRVFSQLVKSEGR 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05146 843 Gene3D - 208 391 - -
Tsu02g05146 843 Gene3D - 33 185 - -
Tsu02g05146 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Tsu02g05146 843 Pfam Protein tyrosine and serine/threonine kinase 505 699 IPR001245 GO:0004672|GO:0006468
Tsu02g05146 843 Gene3D Transferase(Phosphotransferase) domain 1 576 793 - -
Tsu02g05146 843 SMART serkin_6 500 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g05146 843 ProSiteProfiles Protein kinase domain profile. 500 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g05146 843 PANTHER RECEPTOR-LIKE PROTEIN KINASE HERK 1 20 829 - -
Tsu02g05146 843 CDD STKc_IRAK 506 771 - -
Tsu02g05146 843 ProSitePatterns Protein kinases ATP-binding region signature. 506 528 IPR017441 GO:0005524
Tsu02g05146 843 PANTHER OS07G0166700 PROTEIN 20 829 IPR045272 GO:0004714|GO:0006468
Tsu02g05146 843 SUPERFAMILY Protein kinase-like (PK-like) 476 771 IPR011009 -
Tsu02g05146 843 Gene3D Phosphorylase Kinase; domain 1 461 575 - -
Tsu02g05146 843 Pfam Malectin-like domain 36 389 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05146 Tsu-Chr2 60518443 60521885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05146 21 843 Receptor kinase-like Gene Family AT3G46290 65.301 0.0 1088
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tsu02g05146 Malectin_like 2.9e-37 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05146 - - gmx:100806488 1260.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05146 02 60518443 60521885 Tsu02g05146 02 60518443 60521885 ECH
Tsu02g05146 02 60518443 60521885 Tsu02g03499 02 39198801 39201474 ECH
Tsu02g05146 02 60518443 60521885 Tsu02g03499 02 39198801 39201474 PCT