Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05124 ATGGCTAAGTTCATTGTGAGAAATagtaacaaaaagaagagtggaGGTAGCATTGTGAAGCTCATTGAGAAGCTACAAAAGAAAATCTTGCTAGGGAGAACCAAATCAACATCAACCTATGTGCCTGAGGATGTGAAAGAAGGACATTTTGCTGTGATAGCTGAGGATAGAGAAGATCAAGAACCAAAGAGATTTGTGTTACCATTAAGTTGTTTAACAAATCCAACATTTGTTAGGCTATTGGAGCAAGCAGAAGAAGAGTATGGTTTTAATCATGAAGGTGCACTAACTATTCCTTGTAAGCCTAGTGAACTTCACAAGATGTTGCTGCAACAATGGCAACAAGAAGAATACAATTCCTCCACTAACTCTatggttttttaa 384 0.349 MAKFIVRNSNKKKSGGSIVKLIEKLQKKILLGRTKSTSTYVPEDVKEGHFAVIAEDREDQEPKRFVLPLSCLTNPTFVRLLEQAEEEYGFNHEGALTIPCKPSELHKMLLQQWQQEEYNSSTNSMVF 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05124 127 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR32-LIKE 22 119 - -
Tsu02g05124 127 Pfam Auxin responsive protein 33 108 IPR003676 GO:0009733
Tsu02g05124 127 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 22 119 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05124 Tsu-Chr2 60277749 60278228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05124 34 111 Calmodulin-binding Proteins AT3G43120 46.154 1.57e-13 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05124 - K14488 gmx:100794278 146.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05124 02 60277749 60278228 Tsu02g05124 02 60277749 60278228 ECH
Tsu02g05124 02 60277749 60278228 Tsu02g03646 02 41004796 41005209 PCT