Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05115 ATGTGCAAATCCAAAATGGCCATTGACGCTTCCACCCCCAAAAAATCTAAATCTAAATCAACCCCACGTTCACACCGCAACACACAAACACCACCACCAACATCAAAACCACCACCCACACGTGCAACCTCCACACCCACACGTGCAACCACTCTTcccaaaactaaaacaaaaacctCTTCATTCTCCGATAACCCTTCAACTTCCTACGCATCCACCACCGGTTCAACCGGTTTTCATCTCTCAACAGACACATCAATCTCAAGTAGAACATCTCTAACATCACTCCGTGACACACTCCCAGAAAATCCAAACATCTACGACTTCTCCGAAATCTGTTCCGCCACAAACAATTTCCTCTCAAAACGCTACTCATCATCAACCCCTTGCTGGCACTGCACCCTACGTGGAACCGACGTCATTATTTTCCAACGCAAATTCCGACGCAAACTCCAAACCTCTCAGCTTCGTGAACTTCTCTCCGTCGTTTGTCGTAGTCACCACGTCAGCATAATCAAACTTCTCGGAGTTTCAATCTCCGGCGAACATATTTACCTCGTTTACGAATACGTTCACGGTGCGAATCTCTCCGATTGTTTACGAAATTCACGAAACGTTCATTTCACCGTTCTTTCTACATGGATTTCGAGAATGCAGGTTGCGACTGATCTCGCTCATGGACTCGATTACATTCATAATAAAACtggtttgaatttcaattttgttcataaTCATATCAAGAGTAGCGCGATCGTTGTTACCGAACCTGATTTCAATGCTAGGGTTTGTCATTTCGGTGCGGCACAGCTTTGCGGTGAAGCCGTTGAGGAAAACGAAATTGCGACTAAGCAATTGGGGGAAATTACTGAGGAAGGTAGATCGAAGGAGTTGAGAAGCTCCGACGTGCAATTCGAAGGTGTTCGGGGGTATATGTCGCCGGAATTTCAATCCACCGGCGTAGCGACTCAGAAGAGTGATGTTTATGCTTTTGGAGTGGTGATGTTGGAGCTTTTATCAGGAGAGGAACCGTTGAAGTTTAAATTTGATGAGAAGAAGCGTGATTTTGTGAGAATGTCGGTGATTGAATCGGCGAGAGCCGCCGTGGACGGCGGCGACGGGAGTGTGGAAGGGAAGCTGAGGATGTGGGTTGATAGGAGATTGAAAGATTCTTTTCCGGTTGATGTTGCTGAGAAATTGACACGTGTAGCGTTGGATTGTGTACACGTGGATCCAGATAAGAGGCCTAATATGGGACGCGTTGCTGGGAAAATATCCACGCTGTATTTGAAGTCAAAGAATTGGTCTGATAATATGAAAATGCCTGATATGTCCTTTTCATTAGGTCCTCGTTGA 1353 0.4457 MCKSKMAIDASTPKKSKSKSTPRSHRNTQTPPPTSKPPPTRATSTPTRATTLPKTKTKTSSFSDNPSTSYASTTGSTGFHLSTDTSISSRTSLTSLRDTLPENPNIYDFSEICSATNNFLSKRYSSSTPCWHCTLRGTDVIIFQRKFRRKLQTSQLRELLSVVCRSHHVSIIKLLGVSISGEHIYLVYEYVHGANLSDCLRNSRNVHFTVLSTWISRMQVATDLAHGLDYIHNKTGLNFNFVHNHIKSSAIVVTEPDFNARVCHFGAAQLCGEAVEENEIATKQLGEITEEGRSKELRSSDVQFEGVRGYMSPEFQSTGVATQKSDVYAFGVVMLELLSGEEPLKFKFDEKKRDFVRMSVIESARAAVDGGDGSVEGKLRMWVDRRLKDSFPVDVAEKLTRVALDCVHVDPDKRPNMGRVAGKISTLYLKSKNWSDNMKMPDMSFSLGPR 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05115 450 Gene3D Transferase(Phosphotransferase) domain 1 192 444 - -
Tsu02g05115 450 MobiDBLite consensus disorder prediction 11 30 - -
Tsu02g05115 450 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 450 - -
Tsu02g05115 450 MobiDBLite consensus disorder prediction 41 76 - -
Tsu02g05115 450 PANTHER OS09G0572100 PROTEIN 1 450 - -
Tsu02g05115 450 ProSiteProfiles Protein kinase domain profile. 109 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g05115 450 SUPERFAMILY Protein kinase-like (PK-like) 130 420 IPR011009 -
Tsu02g05115 450 Pfam Protein kinase domain 149 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g05115 450 MobiDBLite consensus disorder prediction 1 76 - -
Tsu02g05115 450 Gene3D Phosphorylase Kinase; domain 1 81 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05115 Tsu-Chr2 60168851 60170543 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05115 102 446 Receptor kinase-like Gene Family AT1G51940 30.372 1.70e-39 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Tsu02g05115 Pkinase 5.7e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05115 - - gmx:100792694 609.372