Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu02g05105 | ATGAAGCATCAACTCAAAGTTTCTGTTGCACTTGTTATTAGCTTGCTATGGTTTCAGCACTCACTTTGTGCAAATGAACCTTCTGATTCTGATCTAAACAAGTGGAAATGTAGATGTTCTTTCCAAGTTGACCAGATAAACTCTATTTCTAATTGTTCCAAGTCATGTGATTGCCATTCAGAGACTGCATCCATATGGACATGCATATGTGATTCAAATGGCTTTCCTGAAGTGGCAGCAGGAAGCCATAATCCTAATTGTTTTATTGCCTGCAATTGCATCTGGGGAACTGCTAAGATGTCATTGGGTTCAAAGAAACACATTTCGAGCAAGATTGTAATAACCATTATAGTAATGTGTGTTACATGCACAACTATTGCATTTCTAGCCTCAGTTCTATGTTATGTCCGCCGAAGGAAGAGGCATTATCCTATTCAATCACCAATGATTTCGTCATCAGATAAGGAAACAAGTTATAGCAGTACCAGCAACTTCATTAGTCAGAGGACTTCTTTTGTGCCAGAAATAAAAGGCGTTATTAATTCTCCTATGAGTCATATTACAAGATGCTTTCAAAAAGCCTCTATCTTGTTTGGCAATCAAAGAGAAACATTTCATGGAAATATTGTTCAGTTTTCATTTGCTGAACTGGAAAATGCCACCGAAAACTTTTCAGCTTCCAACCTTGTTGGACTAGGTGGAAGTAGTTATGTATACCGTGGTCGATTGGAAAATGGTAGTAATGTGGCAGTAAAGCGACTTAAAAATCAAGGAGGGCCTGAAGCCGACACTGAATTTTTTACAGAGaTTGAACTATGGTCTAGACTTCATCATTGTCATCTGGTGCCATTGATTGGATACTGCTCAGAATTAAAAGGAAAAACTGTTCAGAGGTTACTAGTATTTGACTACATGAGTAACGGAAATTTGAGGGACCGTTTAGATGGAATTTTCGGAAAAAATATGGATTGGTCTACTCGAGTTACAATTGCATTAGGTGCTGCAAGGGGTTTGGAGTATCTTCATGAAGCAGCTGCTCCTAGAATTCTCCACAGAGATGTCAAATCAACAAACATTCTTCTTGATAAAAATTGGCAAGCAAAAATAACTGATCTGGGTTTGGCTAAAGACTTGAGATCTGGTGACCTCACCAGTTCAGATTCTTCACAAAGAATGAAGGGGACATTTGGATATTTCGCACCTGAGTATGCAATTGTTGGGAGAGCCTCTATTGAGTCTGATGTCTTCAGTTTTGGTGTGGTTCTTCTCGAGCTTATCAGTGGTCGCCAACCAATCCTTAAATCTGCAGGCAAAGAAGAAAGCCTTGTTGTATGGGCTACTCCTCGGTTATATGACAGTAGGCGAGTAATTACAGAGTTGGCTGATCCACAATTGAAAGGAAACTTCCCAGAAGATGAGCTGTATATAATGGCAAACCTAGCAAAGGAGTGCTTACTGTTGGATCCTGATACTAGACCAACTATGAGTGAAGTTGTTCTAATTCTTTCAAGTATTTCCCGAACCAAATCTAGAAGGAGAAGATACATTCAATTGTGCCTTTTTCAGGAACCAGATGATGCAGAGAAGCAGAAACAAGCTTCATGGAGAAGATTTCCTCCTCATAATTCATTACCACGAGGTACTGACTACAATCTTCGTGTTGAAAACGAAGATAAAGATGTAGATACAATTTCAACAGAGTATATGAAGAGTTTGATCCTCTTTACTTCGAAAGGTGAGAGCTGGCGTGCATCAGAAGAGGAAATGGTAGACCTATCGGAACCTCGGTTGGAATCGTTTTTCCCTTGA | 1809 | 0.3941 | MKHQLKVSVALVISLLWFQHSLCANEPSDSDLNKWKCRCSFQVDQINSISNCSKSCDCHSETASIWTCICDSNGFPEVAAGSHNPNCFIACNCIWGTAKMSLGSKKHISSKIVITIIVMCVTCTTIAFLASVLCYVRRRKRHYPIQSPMISSSDKETSYSSTSNFISQRTSFVPEIKGVINSPMSHITRCFQKASILFGNQRETFHGNIVQFSFAELENATENFSASNLVGLGGSSYVYRGRLENGSNVAVKRLKNQGGPEADTEFFTEIELWSRLHHCHLVPLIGYCSELKGKTVQRLLVFDYMSNGNLRDRLDGIFGKNMDWSTRVTIALGAARGLEYLHEAAAPRILHRDVKSTNILLDKNWQAKITDLGLAKDLRSGDLTSSDSSQRMKGTFGYFAPEYAIVGRASIESDVFSFGVVLLELISGRQPILKSAGKEESLVVWATPRLYDSRRVITELADPQLKGNFPEDELYIMANLAKECLLLDPDTRPTMSEVVLILSSISRTKSRRRRYIQLCLFQEPDDAEKQKQASWRRFPPHNSLPRGTDYNLRVENEDKDVDTISTEYMKSLILFTSKGESWRASEEEMVDLSEPRLESFFP | 602 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu02g05105 | 602 | Gene3D | Phosphorylase Kinase; domain 1 | 196 | 304 | - | - | |
Tsu02g05105 | 602 | Gene3D | Transferase(Phosphotransferase) domain 1 | 305 | 522 | - | - | |
Tsu02g05105 | 602 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-KINASE NCRK PROTEIN | 2 | 600 | - | - | |
Tsu02g05105 | 602 | SMART | serkin_6 | 224 | 505 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu02g05105 | 602 | ProSiteProfiles | Protein kinase domain profile. | 224 | 505 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu02g05105 | 602 | PANTHER | OS01G0253100 PROTEIN | 2 | 600 | IPR045271 | GO:0004714|GO:0006468 | |
Tsu02g05105 | 602 | SUPERFAMILY | Protein kinase-like (PK-like) | 205 | 502 | IPR011009 | - | |
Tsu02g05105 | 602 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 349 | 361 | IPR008271 | GO:0004672|GO:0006468 | |
Tsu02g05105 | 602 | CDD | STKc_IRAK | 230 | 505 | - | - | |
Tsu02g05105 | 602 | ProSitePatterns | Protein kinases ATP-binding region signature. | 230 | 252 | IPR017441 | GO:0005524 | |
Tsu02g05105 | 602 | Pfam | Protein kinase domain | 227 | 499 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu02g05105 | Tsu-Chr2 | 60060358 | 60064418 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu02g05105 | 1 | 600 | Receptor kinase-like Gene Family | AT2G28250 | 47.769 | 0.0 | 526 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-XVI | Tsu02g05105 | Pkinase | 4.6e-42 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu02g05105 | - | - | gmx:100499641 | 890.182 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Tsu02g05105 | 02 | 60060358 | 60064418 | Tsu02g03617 | 02 | 40591213 | 40597417 | PCT |