Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05105 ATGAAGCATCAACTCAAAGTTTCTGTTGCACTTGTTATTAGCTTGCTATGGTTTCAGCACTCACTTTGTGCAAATGAACCTTCTGATTCTGATCTAAACAAGTGGAAATGTAGATGTTCTTTCCAAGTTGACCAGATAAACTCTATTTCTAATTGTTCCAAGTCATGTGATTGCCATTCAGAGACTGCATCCATATGGACATGCATATGTGATTCAAATGGCTTTCCTGAAGTGGCAGCAGGAAGCCATAATCCTAATTGTTTTATTGCCTGCAATTGCATCTGGGGAACTGCTAAGATGTCATTGGGTTCAAAGAAACACATTTCGAGCAAGATTGTAATAACCATTATAGTAATGTGTGTTACATGCACAACTATTGCATTTCTAGCCTCAGTTCTATGTTATGTCCGCCGAAGGAAGAGGCATTATCCTATTCAATCACCAATGATTTCGTCATCAGATAAGGAAACAAGTTATAGCAGTACCAGCAACTTCATTAGTCAGAGGACTTCTTTTGTGCCAGAAATAAAAGGCGTTATTAATTCTCCTATGAGTCATATTACAAGATGCTTTCAAAAAGCCTCTATCTTGTTTGGCAATCAAAGAGAAACATTTCATGGAAATATTGTTCAGTTTTCATTTGCTGAACTGGAAAATGCCACCGAAAACTTTTCAGCTTCCAACCTTGTTGGACTAGGTGGAAGTAGTTATGTATACCGTGGTCGATTGGAAAATGGTAGTAATGTGGCAGTAAAGCGACTTAAAAATCAAGGAGGGCCTGAAGCCGACACTGAATTTTTTACAGAGaTTGAACTATGGTCTAGACTTCATCATTGTCATCTGGTGCCATTGATTGGATACTGCTCAGAATTAAAAGGAAAAACTGTTCAGAGGTTACTAGTATTTGACTACATGAGTAACGGAAATTTGAGGGACCGTTTAGATGGAATTTTCGGAAAAAATATGGATTGGTCTACTCGAGTTACAATTGCATTAGGTGCTGCAAGGGGTTTGGAGTATCTTCATGAAGCAGCTGCTCCTAGAATTCTCCACAGAGATGTCAAATCAACAAACATTCTTCTTGATAAAAATTGGCAAGCAAAAATAACTGATCTGGGTTTGGCTAAAGACTTGAGATCTGGTGACCTCACCAGTTCAGATTCTTCACAAAGAATGAAGGGGACATTTGGATATTTCGCACCTGAGTATGCAATTGTTGGGAGAGCCTCTATTGAGTCTGATGTCTTCAGTTTTGGTGTGGTTCTTCTCGAGCTTATCAGTGGTCGCCAACCAATCCTTAAATCTGCAGGCAAAGAAGAAAGCCTTGTTGTATGGGCTACTCCTCGGTTATATGACAGTAGGCGAGTAATTACAGAGTTGGCTGATCCACAATTGAAAGGAAACTTCCCAGAAGATGAGCTGTATATAATGGCAAACCTAGCAAAGGAGTGCTTACTGTTGGATCCTGATACTAGACCAACTATGAGTGAAGTTGTTCTAATTCTTTCAAGTATTTCCCGAACCAAATCTAGAAGGAGAAGATACATTCAATTGTGCCTTTTTCAGGAACCAGATGATGCAGAGAAGCAGAAACAAGCTTCATGGAGAAGATTTCCTCCTCATAATTCATTACCACGAGGTACTGACTACAATCTTCGTGTTGAAAACGAAGATAAAGATGTAGATACAATTTCAACAGAGTATATGAAGAGTTTGATCCTCTTTACTTCGAAAGGTGAGAGCTGGCGTGCATCAGAAGAGGAAATGGTAGACCTATCGGAACCTCGGTTGGAATCGTTTTTCCCTTGA 1809 0.3941 MKHQLKVSVALVISLLWFQHSLCANEPSDSDLNKWKCRCSFQVDQINSISNCSKSCDCHSETASIWTCICDSNGFPEVAAGSHNPNCFIACNCIWGTAKMSLGSKKHISSKIVITIIVMCVTCTTIAFLASVLCYVRRRKRHYPIQSPMISSSDKETSYSSTSNFISQRTSFVPEIKGVINSPMSHITRCFQKASILFGNQRETFHGNIVQFSFAELENATENFSASNLVGLGGSSYVYRGRLENGSNVAVKRLKNQGGPEADTEFFTEIELWSRLHHCHLVPLIGYCSELKGKTVQRLLVFDYMSNGNLRDRLDGIFGKNMDWSTRVTIALGAARGLEYLHEAAAPRILHRDVKSTNILLDKNWQAKITDLGLAKDLRSGDLTSSDSSQRMKGTFGYFAPEYAIVGRASIESDVFSFGVVLLELISGRQPILKSAGKEESLVVWATPRLYDSRRVITELADPQLKGNFPEDELYIMANLAKECLLLDPDTRPTMSEVVLILSSISRTKSRRRRYIQLCLFQEPDDAEKQKQASWRRFPPHNSLPRGTDYNLRVENEDKDVDTISTEYMKSLILFTSKGESWRASEEEMVDLSEPRLESFFP 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05105 602 Gene3D Phosphorylase Kinase; domain 1 196 304 - -
Tsu02g05105 602 Gene3D Transferase(Phosphotransferase) domain 1 305 522 - -
Tsu02g05105 602 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE NCRK PROTEIN 2 600 - -
Tsu02g05105 602 SMART serkin_6 224 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g05105 602 ProSiteProfiles Protein kinase domain profile. 224 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g05105 602 PANTHER OS01G0253100 PROTEIN 2 600 IPR045271 GO:0004714|GO:0006468
Tsu02g05105 602 SUPERFAMILY Protein kinase-like (PK-like) 205 502 IPR011009 -
Tsu02g05105 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 349 361 IPR008271 GO:0004672|GO:0006468
Tsu02g05105 602 CDD STKc_IRAK 230 505 - -
Tsu02g05105 602 ProSitePatterns Protein kinases ATP-binding region signature. 230 252 IPR017441 GO:0005524
Tsu02g05105 602 Pfam Protein kinase domain 227 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05105 Tsu-Chr2 60060358 60064418 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05105 1 600 Receptor kinase-like Gene Family AT2G28250 47.769 0.0 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Tsu02g05105 Pkinase 4.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05105 - - gmx:100499641 890.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05105 02 60060358 60064418 Tsu02g03617 02 40591213 40597417 PCT