Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05099 ATGAATGAAATGCTCTTCATAATTAGAGGCCATCTTGTTTCTTACACCACAAATGGAGGCCAGGCTGGATTCTTCAACTCATGTCGTATTATTGGTCCAGGCGATTTTTGTGGCGAAGAACTATTAACATGGGCATTGGATCCAAGACCAAGTATGATACTCCCTTCTTCAACAAGAACAGTTAAAGCTATCTCAGAAGGTGTGCGCAGCTGTGCTGTGATGGCTCCGGTGAATTTTTCTGTTCTGGGTAGGGTTCATGGCCtactttga 270 0.4296 MNEMLFIIRGHLVSYTTNGGQAGFFNSCRIIGPGDFCGEELLTWALDPRPSMILPSSTRTVKAISEGVRSCAVMAPVNFSVLGRVHGLL 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05099 89 PANTHER PROTEIN CNGC15A 2 75 - -
Tsu02g05099 89 Gene3D Jelly Rolls 1 83 IPR014710 -
Tsu02g05099 89 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 2 75 - -
Tsu02g05099 89 SUPERFAMILY cAMP-binding domain-like 2 66 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05099 Tsu-Chr2 60028414 60028835 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05099 1 66 Ion Channels AT2G28260 86.364 5.92e-36 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05099 K05391 - gmx:100811847 125.176