Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05061 atGTCTGTCATCGACATTCTCTTCCGTGTCGACGAAGTTTGcaaaaaatatgacaaataCGACATTGATAAACAGCGTGAACAGAATGCTTACGGTGATGACGCATTCGCTCGTGTCTATAATGTTGTTGATTCCACCATTCAACAAGCTCTCATTAAATCTGAGGCTGCTGCCAAGGAGAGTAACAGGGCAGTTGCTGCGGCTTGGAATGCTGAGGTTCGTAGAGCCAAAGGGAGATTGATGGACGAAGTTCCTAAACTTCGTAAGCTCGCTAATAAGAAGGCTAAAGGTCTAACAAAGGAAGACATAGCCGCTCGTCAAGATCTTGTTCTTGTATTGCCAGAAAGAATCCAAGCAATACCAGACGGCATTACATCTGCTGCTAGTCATACTGGAGGATGGGCTGCTACATCAGCTCATCCGCATATCAAGTTTGATTCGCCAGAGGGACCTGTTGACAGTGAATATTTCAGTCATACTGAAGAATCTAGTCAGTTTAGAAATGAATATGAAATGCGGAAGTTGAAACAGGATGAAGGGCTTGATATCATATCAGAAGGATTGGATACTTTGAAAAATCTAGCACTTGATATGAATGAGGAAATGGATCGGCAAGTTCCTTTAATGGATGAAATTGACTCAAAGGTGGATAGGGCAAACAGTGAAGTGAGAAATACTAACTTAAAGCTGAAGAAAACTATCACCGAGATGAGGTCCAGTCGAAATTTCTGCATCGACATCACTCTAATGTGTGTTCTTCTAGGAATCATTATGTGGTTATACAATGCACTAAAGTGA 798 0.411 MSVIDILFRVDEVCKKYDKYDIDKQREQNAYGDDAFARVYNVVDSTIQQALIKSEAAAKESNRAVAAAWNAEVRRAKGRLMDEVPKLRKLANKKAKGLTKEDIAARQDLVLVLPERIQAIPDGITSAASHTGGWAATSAHPHIKFDSPEGPVDSEYFSHTEESSQFRNEYEMRKLKQDEGLDIISEGLDTLKNLALDMNEEMDRQVPLMDEIDSKVDRANSEVRNTNLKLKKTITEMRSSRNFCIDITLMCVLLGIIMWLYNALK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05061 265 PANTHER SYNTAXIN-72 1 262 - -
Tsu02g05061 265 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 171 233 IPR000727 -
Tsu02g05061 265 Gene3D - 171 232 - -
Tsu02g05061 265 PANTHER SYNTAXIN 1 262 IPR045242 -
Tsu02g05061 265 Coils Coil 209 236 - -
Tsu02g05061 265 SUPERFAMILY SNARE fusion complex 165 232 - -
Tsu02g05061 265 Pfam SNARE domain 208 257 IPR000727 -
Tsu02g05061 265 CDD SNARE_Qc 176 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05061 Tsu-Chr2 59678509 59680669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05061 1 265 SNARE and Associated Proteins AT3G09740 62.921 3.15e-126 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05061 K08506 - gmx:100777251 410.609