Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05051 ATGGTGAGCTGTGCAGGATGCAAACAGCAGCATCGACGTTGTGGCGCTCAATGTCCAACCCGGACTTTCTTTAATGATCAACAAGAGTATCGCCAAGTACACGACACTTTCACCAGTGACCACGTTAGAAGATGGATGGCTGCAGCAAGGTTAAACAACAATGGGGCACGCTGTGCTGCAGCCTTGAAGTGGGAAGGTATGGCAAGGTCAAACGATCCAGTGGGCGGATCTCATGGTCTTTATCTCCAAGCTCGAGCAGAGAGACAACACGCAAACCAATTGAATGAACAACTGCTCCATGAAAATGGCATACTCCTAAATATGATTTCCGGATTAATGCAACAACCTCCACCTCCTCCTCAAGGCCCACAACAGTAG 378 0.4868 MVSCAGCKQQHRRCGAQCPTRTFFNDQQEYRQVHDTFTSDHVRRWMAAARLNNNGARCAAALKWEGMARSNDPVGGSHGLYLQARAERQHANQLNEQLLHENGILLNMISGLMQQPPPPPQGPQQ 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05051 125 Coils Coil 81 101 - -
Tsu02g05051 125 Pfam Lateral organ boundaries (LOB) domain 3 92 IPR004883 -
Tsu02g05051 125 ProSiteProfiles LOB domain profile. 2 105 IPR004883 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05051 3 81 AS2 family AT1G06280 30.864 6.54e-10 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Tsu02g05051 LOB 5.1e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05051 - K06240 fve:101308546 48.521