Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05041 ATGTCAAGAAAGCTACGATTTTTCAAGGATCAGGTCAATAAAGCTGGTCTAATGTCGTCTTCTCGTACTCTATTGCAACCGGACATTGACTTGGAGGATTTAGAGGTACATCTTGCTGAGCATGAACATGAGCTAATTGAAATGAACTCCAATAGTGACAAACTTCGGCAATCATATAATGAACTTTTGGAATTCAAGATTGTACTACAAAAGGCATGTGGTTTTCTTATTTCAAGTCATGGCCGTGCTGTTTCAGGCGAGATAGAACTACAAGATAATGTATACTCAAATGATGACTATGCCGATACAGCATCTTTGCTTGAACAGGAAATGAGACCCCAACCATCAAATACATCTGGTTTAAGATTTATCAGTGGGATAATTTGTAAATCCAAGGCTCTTAGGTTTGAAAGGATGTTATTTCGTGCTACAAGAGGCAATATGTTTTTCAATCAGGCACCAGCGGGAGAGCAAATCATGGATCCTGTTTCAACTGAGATGATCGAGAAAACAGTATTCGTTGTGTTTTTCTCCGGGGAACAGGCAAGAACAAAGATTCTGAAAATTTGCGAGGCATTTGGTGCGAATTGTTATCCTGTTCCTGAAGATATAAGTAAGCATGGGCAAATAACTAGGGAGGTTACGTCACGTCTTACTGACTTAGAGGCAACTTTGGATGCTGGGATTAGGCACCGGAACAAGGCGCTATCGTCTATTGCAGACCATCTAGCAAAATGGATGGACCTGGTAAGAAGAGAGAAGGCCGTCTATGATACATTGAACATGCTAAATTTTGATGTCACAAAAAAATGTCTTGTTGCAGAGGGATGGTGCCCTATGATTGCAAAAACACagATGCAGGAGGTACTGCAACGTGCAACTTTTGATAGCAATTCTCAAGTTGGCATAATCTTCCATCAAATGGATGCAGTGGAAGCCCCACCTACATATTTTAAGACCAACACTTTCACAAATCCGTATCAGGAAATTGTTGATGCATATGGTGTTGCAAGATACCAAGAAGCAAATCCTGCAGTTTACACAACTGTTATATTTCCCTTCCTATTTGCTATGATGTTTGGGGACTGGGGTCATGGAATTTGCCTGTTGATGGGAGCATTGGTTCTTATAGCACGCGAAAACAAGCTCAGTACACAGAAGCTTGGAAGCTTCATGGAGATGCTATTTGGTGGGCGCTATGTGATTCTTTTGATGTCACTATTTTCTATCTATTGTGGGTTAATCTACAACGAGTTCTTTTCTGTTCCTTTTCACATATTTGGTCCATCAGCATTTCGATGCCATGATACTTCATGCAGAGATGCATATACTATTGGTTTAGTCAAATACCGTGATCCATACCCATTTGGTGTGGATCCTAGCTGGCGTGGAAGTCGTTCAGAGTTGGCTTTTCTGAACTCTTTGAAGATGAAAATGTCCATTCTGTTTGGTGTGGCACATATGAATTTGGGAATTATATTAAGTTATTTCAATGCTCGTTTCTTTGGAAGCTCACTGGATATAAGGTACCAATTTGTGCCACAGATGATTTTCCTTAACAGTCTTTTTGGATATCTTTCCCTTCTCATCATTGTTAAGTGGTGTACGGGCTCTCAAGCAGATCTTTATCATGTGatgatatatatgtttttaagcCCTACAGACGAACTTGGTGAGAATGAGTTGTTCTGGGGCCAAAGACCACTTCAAATTGTGTTATTGCTTTTGGCTTTAATTGCAGTTCCATGGATGCTCTTTCCAAAACCTTTTATACTAAAGAAGCTTCATACCGAGAGATTTCAAGGTCGTAGTTATGGTATTTTGAATAGTTCTGAATTGGATCTTGAGGTGGAGCCAGATTCTGCCAGGCAACATCATCATGAAGAATTCAATTTTAGTGAGGTCTTTGTTCACCAAATGATCCACTCCATCGAGTTTATTTTAGGTTCAGTTTCAAATACGGCATCCTATCTTCGACTTTGGGCATTAAGTTTGGCTCACTCGGAACTTTCTACCGTTTTCTATGAGAAAGTCTTGCTTCTTGCTTGGGGGTATGACAATCTCATCGTTAAGTTAGTGGGGCTAACAGTTTTTGCCTTTGCAACGGCCTTTATTCTACTTATGATGGAGAGTCTCAGTGCTTTTCTTCATGCCCTGCGACTTCACTGGGTAGAATTTCAAAATAAGTTCTACCATGGTGATGGATACAAATTCAAGCCCTTTTCGTTTGCTTCTTTAACAGAGGATGATGATTGA 2256 0.3985 MSRKLRFFKDQVNKAGLMSSSRTLLQPDIDLEDLEVHLAEHEHELIEMNSNSDKLRQSYNELLEFKIVLQKACGFLISSHGRAVSGEIELQDNVYSNDDYADTASLLEQEMRPQPSNTSGLRFISGIICKSKALRFERMLFRATRGNMFFNQAPAGEQIMDPVSTEMIEKTVFVVFFSGEQARTKILKICEAFGANCYPVPEDISKHGQITREVTSRLTDLEATLDAGIRHRNKALSSIADHLAKWMDLVRREKAVYDTLNMLNFDVTKKCLVAEGWCPMIAKTQMQEVLQRATFDSNSQVGIIFHQMDAVEAPPTYFKTNTFTNPYQEIVDAYGVARYQEANPAVYTTVIFPFLFAMMFGDWGHGICLLMGALVLIARENKLSTQKLGSFMEMLFGGRYVILLMSLFSIYCGLIYNEFFSVPFHIFGPSAFRCHDTSCRDAYTIGLVKYRDPYPFGVDPSWRGSRSELAFLNSLKMKMSILFGVAHMNLGIILSYFNARFFGSSLDIRYQFVPQMIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDELGENELFWGQRPLQIVLLLLALIAVPWMLFPKPFILKKLHTERFQGRSYGILNSSELDLEVEPDSARQHHHEEFNFSEVFVHQMIHSIEFILGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLIVKLVGLTVFAFATAFILLMMESLSAFLHALRLHWVEFQNKFYHGDGYKFKPFSFASLTEDDD 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05041 751 Pfam V-type ATPase 116kDa subunit family 1 743 IPR002490 GO:0033179|GO:0046961|GO:1902600
Tsu02g05041 751 PANTHER VACUOLAR PROTON ATPASE A1 1 751 - -
Tsu02g05041 751 PANTHER VACUOLAR PROTON ATPASES 1 751 IPR002490 GO:0033179|GO:0046961|GO:1902600
Tsu02g05041 751 Coils Coil 31 58 - -
Tsu02g05041 751 PIRSF ATP6V0A1 1 751 IPR026028 GO:0000220|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05041 Tsu-Chr2 59479268 59490000 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05041 1 744 Primary Pumps ATPases(2) AT2G28520 79.893 0.0 1238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05041 K02154 - gmx:100776037 1369.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05041 02 59479268 59490000 Tsu02g03521 02 39518601 39528601 PCT