Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05028 ATGAACCGAATTCGCAACACCCGAtttcaaaaacacaaacaacaacaGAAAGTAACTACAACCGCACCGCAAAAAATGAACTCCGTCACCGGAGATCGAACTTCTCCGTCTACTGTACGCGATGATGGCTGGTCCGAAGAAGCAACTTTCACACTAATCGACGCTTGGGGAGAACTTTACAAGAAAGTTAACCGCAAAAACTTCCGTCAGTATCACTGGAAAGAAATCGCGAAAGCCGTTAACGACCACCATGGTTACAGTCGGAAATCTCGCCGTACTTACGTTCAATGTAAGAATCGATTCGACGCACTCAAGAAGAAGTACGCAATTGAGAAAACTAGGGTTTCTGAAAACGGTTTTTACGATAACGATGATGAAGATGCATTTCCTTTTTATGATaaactcgattcgataattggTGATACTTTACCGACAAAGAAGGTTAAGCCGGCGTTTGAACCTGAACCTGAACCTCCTGTGAATGTTCCGGCATGGGCACTTGCACCAGTAGGTCGTCGATCTGGTGCTCAGAGCACTCAGAAACGACATGCAACGGCGACCGAGGAGGAGAGTGTGGAGGAGGATTCACGTTTTCGCCGGAATTTATCTGCATTTGCTGCTGCGGCTGCTGCTGCAGCGGAAGCAGAGATCGATAATTCAGATTCAGATGATTCTTATTTTGTTAATTCAGATGGTTCAGAGATGAGCAATGAGAATAGGAAGAGGAAGAGAGGAAGAAAGGATGTGGAATTTGGGTATAGAGAGGTTGCAGGAAGAAATGATAGGGAATTTGGGAGTAGAGAGGTTGCAAATGTTATAGAGAAGTTTAGTGAGGTACATGAGAGAGTCGAGTCATCGAAACAGCGAAGAAATGGTCGGGAGAAGTTCAGTGAGAAACACGAGAGAGTCGAGTCTTCGAAGCAGCGAAGAAATCCTAAGGAGAAGTTTAGTGAGGTACACGAGAGACTCGAGTCATCGAAGCAGCGAAGAAATGCTAGGGAGAAGTTTAGTGAGATACAAGAGAGAGTGGAATTGCCGAAGCAGCGGAGAAATGTTGATTTGGAGAAACAAAATATGCAATTTCAAAGGGATTGTGAGAGGATGCTGCAGCTGCAAAAAGCCAACCACTCAAAGGAAACGGAAAGAACGACTTCAATGAATGATCGAAATGAACAAATCTCAAGAGTTAAAAATCTACCAGCTCCTACCCAAAACAGGTCAGATGCCCAGTCTACCAAAAGGAACGTTAGAGGTGCCACGCGGATGAAGAAGTTAGCACTTGACCTTATTGATGGACAAAAATTATCTATTGAATTTGATGAATCAACTGCAAAACCGTTAGGGGAAAACAAGACAAAGTTCAAGAGTTATGTGGCTTTCCTTGGTCGAAGCAAAGTCAGTATTTTGACGGATGATTGGGACTCCGTAGATCAGAGTGTGAAGGATGAAATTTGGACAGATATCCTGAAAGTATGGGATGTTCCTCATTCCGGTTTCTTGCGAAAGAAATGGGTTTCATATGCGGGTGAGCGTTGGAGAGCATTTAAGACGAATTTAACTTCTAGATATATACATGGGGATCTTCGTGACAGATCTCCTCTTGAGATCTATAATTTTCTTGATGAGGAAACTTGGCAGGCTTTTGTTCAGATACGACTGGACCCTACCTTCCAGGAGATTAGAAAGAGAGCGCAAATGAGTTGTGCTCAGAATAAAACCCCTCACAGATTGTCTCGTGGGGGATATGAGTTGCTCCAAGAGAAGATGATGCaagagaaattaaaagaaaagaaagaaacttTGGGTGGTTCAGTAGCTGCACCTCCATCTCCACCAGCACGCCATGAGCAATGGAAGAGAGCACGACAAAAACCATCAGGAGATTACACAACTGAGGACACACGCATTATTGCGGAGAAAATTGATTCTTTGGTTGAAAAAACATCTCAAGGAACTTTTGTTCCAGAAGGACGTAAAGATATTTTGACAGAAGCCATTGGCCGACCTGAGCACGGCGGTTTTGTTCGTGGTGTTGGTCGAGGTGTGGGTATTCGGCAATACTTTGGACCACCACCACGTGGCTCCACCCCTCCTGTTTTTAGTAGGGAACAACTACAGACCATAAAAGTGGAGCTCACTCAGCAAATTAAAGAGGAATTGATGCAGGATCTGGAAGCTATGGGTTTCTCTAAAAAACCCTCGAATTTCCCAACTTGTTCTCGAAATACTGCTGTACCTGCGAGCACGAAGGGTAGTTCATCTATTGTGCCTCCTATACCGGAGGAGGATGACACCCCAGAACAATGTGAACTGTATGTTGATAATTTATTTCATCCAGTGGCCTATGGTAATGTGTACAAGTTGGGGCCTGCCATACATAATCAGATGCTAGATAATGATATGCTGAGGGTGGTGGTTAGCGAGGTGCTAGAGGAACATGCTCAAGTGCCTATTCCCACTGACGAGGTGGAAACGGTTGAGCAGGCCCTCAACAATTTCATTCAATGGCCGAAAAGACTCGTGGTGATTGTTTCTGATAAGGCTGTTGACGGATTTGAAAAAGACGATGTTTCACCCATTGACGGATTTGAAAAAGACAATGTTTCACCCAAAAAGTCTGAGCCTCAACTAGATTCCGTCCAACAACTGGTTTTAAAGGCGATGTGTATGTCAGAATCTATAAAGCTCGATTTGGAACACGATAGGATGAAGTCTCTCTGGCTCTCACAGAGAGATATTATGGAGTTGTGTATGGGTAAACAAGAATTATCCATAACTATTCTAAGATTGTGGTTAACgTATTTGAACCGTCTTTCTATTAATGTGGGTAAGAATGAATTGTATGGATTTATTGATCCATGTTTCATTCAAAGTCAACATGATCCAACTAATGCTGAAGCCTATATACAAAGCAAGTTATCCGATGATAAAAAAGAGTGTTACCTAGCACCTTATCATAACAATCATCATTGGCAATTGCTCATTATTTGTCCTAGGAAGAATAATGTAGTATTCTTATGTTCGTTGGAAAGAAAGCCggataaaaatattattcacaTTGTTGATTCAGCTTTGGATGGATATCATAAGCTGCAAGGTGTTCAAAAGAAGAAGCCAACATGGATATACCCTATTTGTCAAAGACAACCAGAGAGTTACGAGTCCGGCTACTATATTATGATACATATGTTGAAAATTGTATCTACTGGTATTGTTGATTCATGGATGAAGATATTTGGAAATCCAGAACCATTCCAGGAGGATGAACTTGTAAACGTTCGACAACGATGTGCAAGTTTGATCCTTGATTTTATTCAAGGAATTTAA 3327 0.4145 MNRIRNTRFQKHKQQQKVTTTAPQKMNSVTGDRTSPSTVRDDGWSEEATFTLIDAWGELYKKVNRKNFRQYHWKEIAKAVNDHHGYSRKSRRTYVQCKNRFDALKKKYAIEKTRVSENGFYDNDDEDAFPFYDKLDSIIGDTLPTKKVKPAFEPEPEPPVNVPAWALAPVGRRSGAQSTQKRHATATEEESVEEDSRFRRNLSAFAAAAAAAAEAEIDNSDSDDSYFVNSDGSEMSNENRKRKRGRKDVEFGYREVAGRNDREFGSREVANVIEKFSEVHERVESSKQRRNGREKFSEKHERVESSKQRRNPKEKFSEVHERLESSKQRRNAREKFSEIQERVELPKQRRNVDLEKQNMQFQRDCERMLQLQKANHSKETERTTSMNDRNEQISRVKNLPAPTQNRSDAQSTKRNVRGATRMKKLALDLIDGQKLSIEFDESTAKPLGENKTKFKSYVAFLGRSKVSILTDDWDSVDQSVKDEIWTDILKVWDVPHSGFLRKKWVSYAGERWRAFKTNLTSRYIHGDLRDRSPLEIYNFLDEETWQAFVQIRLDPTFQEIRKRAQMSCAQNKTPHRLSRGGYELLQEKMMQEKLKEKKETLGGSVAAPPSPPARHEQWKRARQKPSGDYTTEDTRIIAEKIDSLVEKTSQGTFVPEGRKDILTEAIGRPEHGGFVRGVGRGVGIRQYFGPPPRGSTPPVFSREQLQTIKVELTQQIKEELMQDLEAMGFSKKPSNFPTCSRNTAVPASTKGSSSIVPPIPEEDDTPEQCELYVDNLFHPVAYGNVYKLGPAIHNQMLDNDMLRVVVSEVLEEHAQVPIPTDEVETVEQALNNFIQWPKRLVVIVSDKAVDGFEKDDVSPIDGFEKDNVSPKKSEPQLDSVQQLVLKAMCMSESIKLDLEHDRMKSLWLSQRDIMELCMGKQELSITILRLWLTYLNRLSINVGKNELYGFIDPCFIQSQHDPTNAEAYIQSKLSDDKKECYLAPYHNNHHWQLLIICPRKNNVVFLCSLERKPDKNIIHIVDSALDGYHKLQGVQKKKPTWIYPICQRQPESYESGYYIMIHMLKIVSTGIVDSWMKIFGNPEPFQEDELVNVRQRCASLILDFIQGI 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05028 1108 MobiDBLite consensus disorder prediction 615 631 - -
Tsu02g05028 1108 MobiDBLite consensus disorder prediction 13 42 - -
Tsu02g05028 1108 Coils Coil 351 371 - -
Tsu02g05028 1108 MobiDBLite consensus disorder prediction 735 765 - -
Tsu02g05028 1108 MobiDBLite consensus disorder prediction 1 42 - -
Tsu02g05028 1108 MobiDBLite consensus disorder prediction 735 755 - -
Tsu02g05028 1108 SUPERFAMILY Cysteine proteinases 902 1103 IPR038765 -
Tsu02g05028 1108 Pfam Myb/SANT-like DNA-binding domain 42 138 IPR044822 -
Tsu02g05028 1108 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 347 859 - -
Tsu02g05028 1108 MobiDBLite consensus disorder prediction 183 197 - -
Tsu02g05028 1108 MobiDBLite consensus disorder prediction 374 388 - -
Tsu02g05028 1108 MobiDBLite consensus disorder prediction 171 197 - -
Tsu02g05028 1108 MobiDBLite consensus disorder prediction 215 246 - -
Tsu02g05028 1108 Gene3D - 44 109 - -
Tsu02g05028 1108 MobiDBLite consensus disorder prediction 279 342 - -
Tsu02g05028 1108 PANTHER OS10G0338966 PROTEIN-RELATED 347 859 - -
Tsu02g05028 1108 MobiDBLite consensus disorder prediction 374 418 - -
Tsu02g05028 1108 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 860 1056 - -
Tsu02g05028 1108 Coils Coil 702 722 - -
Tsu02g05028 1108 MobiDBLite consensus disorder prediction 389 416 - -
Tsu02g05028 1108 MobiDBLite consensus disorder prediction 595 631 - -
Tsu02g05028 1108 PANTHER OS10G0338966 PROTEIN-RELATED 860 1056 - -
Tsu02g05028 1108 Gene3D Adenoviral Proteinase; Chain A 884 1103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05028 Tsu-Chr2 59329715 59334651 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05028 27 185 Trihelix Transcription Factor Family AT3G14180 38.788 8.95e-23 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Tsu02g05028 Myb_DNA-bind_4 2.1e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05028 - - mtr:MTR_2g092960 1443.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05028 02 59329715 59334651 Tsu02g05028 02 59329715 59334651 ECH