Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04997 ATGGGAATGAAGAGCACAGGTGGAGAAATAGTTCAAGTTCAAGGTGGTCACATTGTTAGAGCAACTGGTAGAAAAGATAGGCACAGTAAGGTATATACTGCGAAAGGTCCTCGCGATCGGCGTGTTCGTTTATCAGCACATACAGCAATTCAATTCTATGATGTTCAAGATCGTCTCGGTTATGATAGACCGAGTAAAGCCGTTGATTGGCTTATCAAAAAGGCGAAATCGGCTATTGATAAGCTTGATCAACTGCCTCCATGGAATCCAATTCCGAATGCGACCGAAGAGTTGCAAGATGAAGGGACTAATAATAATGTAGTAGAAACAAATGAAATGGTTATTGCTGCAGAAAATTCAGAATCTTCTGGTTACAATATGCAGCAGAATAATCACAATCAGAATCACCATAACCATTCAGCTTTTATTCAATCAACTATTGATAATGATGCTATAGCATTTTTTCCAACAAGTTCTGTTGCTGAAACTATGAATTTTCAAAGCTATTCTTCTGATATAATCTCAAGAACAAACAACTCAACACAGGATCTTGGTCTCTCACTTCATTCATTTCAAGATAATTCAGCTTCAAATGATCAAACACTTTTCTCTGAATCAAACCCTGTTGGATTTGATGCTAATTATCATAGGATTGTGAATTGGAACAATGATCATGGAACAACTGATATGAATAGAACTGGTTTCATGGTTAATTCGCCTGCGTTTTTAGGCCAAGGTTCGGCTTTTTCCGCCCATAGGGGGACCCTTCAGTCCAGTTTTTCGCCATCTCTTCGTCCTTGGAATGATATTCCAATGACGGATTCTTCAGTGGATCATCCTAATCACAAATCTCATCAACCAATTCATCAAGCTTCTATCTTTGGTAGCAGGTTTTTGTCTGATGCTTTGACAGGTTTCTGTATTCCTGCTAGAATTCAAGGCGACGATGAGAGCCATGGAGTTGGTTCCGAAAGGCCATCCTCTTCGTCTAATTCTCATCACTAA 1005 0.393 MGMKSTGGEIVQVQGGHIVRATGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKLDQLPPWNPIPNATEELQDEGTNNNVVETNEMVIAAENSESSGYNMQQNNHNQNHHNHSAFIQSTIDNDAIAFFPTSSVAETMNFQSYSSDIISRTNNSTQDLGLSLHSFQDNSASNDQTLFSESNPVGFDANYHRIVNWNNDHGTTDMNRTGFMVNSPAFLGQGSAFSAHRGTLQSSFSPSLRPWNDIPMTDSSVDHPNHKSHQPIHQASIFGSRFLSDALTGFCIPARIQGDDESHGVGSERPSSSSNSHH 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04997 334 PANTHER TRANSCRIPTION FACTOR TCP4 2 334 - -
Tsu02g04997 334 MobiDBLite consensus disorder prediction 314 334 - -
Tsu02g04997 334 Pfam TCP family transcription factor 23 138 IPR017887 -
Tsu02g04997 334 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
Tsu02g04997 334 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 334 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04997 Tsu-Chr2 58998833 59002276 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04997 8 334 TCP Transcription Factor Family AT1G53230 43.360 1.50e-71 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Tsu02g04997 TCP 7e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04997 - - gmx:100796390 429.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04997 02 58998833 59002276 Tsu02g04320 02 51719162 51720913 ECH
Tsu02g04997 02 58998833 59002276 Tsu02g04997 02 58998833 59002276 ECH