Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04995 ATGGCACAATTACCTCCTAAGATTCCAAATATGTCACCTAGTTGGCCAGATTTTTCCATTCATCAACAAAATATTATGCCAAACATGTCACAACCTAATAACATTGTCACAATCACAAACAATTACAATAATAATCATCAACAAGATCAGAATCCTTCATGGGTGGACGAATTTCTCGACTTCTCGTCCGCTAGGCGAGGCGCTCACCGAAGGTCGGTGAGCGATTCTGTTACGTTCTTAGAGACACCAATGCTCGATGAATGTCCAAGTAAACAACATAATAACAATGATAACGAGTTTGATAAGTTTGATGATGAACAATTTTTGTCCATGTTTAATGATGAAATAGCCGGTGTTCATAACATGCCGCCGACATTGTCCTCGTCGAATCCTTCGAGTCCTTCGGATCAGAATTTTGTCAATGATGAGAATGAGATGAATAAACATGTGAAGAATGAGATGAAGAaagaggaaggttatgagaaacaattgaaaaatgaaCCTGATGAGGTTGAAAGCCAATGCAATCAAGAAAATTCACAGCCTCAAAATAGCAACAATGCTACTTCTTCTTCTAATGATAGAATTACTGATCCAAAGAGAGTCAAAAGAATCTTGGCAAATAGGCAATCAGCACAAAGGTCACGTGTGAGGAAGTTGCAATACATATCAGAGCTTGAGAGAAGTGTAACTTCTTTGCAGGCTGAAGTTTCAGTGCTATCTCCAAGAGTTGCATTTTTGGACCATCAACGTTTGCTTCTTAATGTTGACAACAGTGCTCTCAAGCAAAGAATTGCAGCTCTTGCTCAAGACAAAATTTTCAAAGAtgCTCATCAAGAGGCACTGAAGAGGGAAATAGAGAGATTAAGACAAGTATATCACAATCAAAATCTCAAGAAGATTGATAATGGATCACCCTTACCATCTCCATCACAAAAGCCAATGTGTGATGCTCAAACAGAAAATGAACAACTTCTCAATGTATGA 987 0.3708 MAQLPPKIPNMSPSWPDFSIHQQNIMPNMSQPNNIVTITNNYNNNHQQDQNPSWVDEFLDFSSARRGAHRRSVSDSVTFLETPMLDECPSKQHNNNDNEFDKFDDEQFLSMFNDEIAGVHNMPPTLSSSNPSSPSDQNFVNDENEMNKHVKNEMKKEEGYEKQLKNEPDEVESQCNQENSQPQNSNNATSSSNDRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHNQNLKKIDNGSPLPSPSQKPMCDAQTENEQLLNV 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04995 328 MobiDBLite consensus disorder prediction 119 201 - -
Tsu02g04995 328 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 198 250 IPR004827 GO:0003700|GO:0006355
Tsu02g04995 328 Coils Coil 279 299 - -
Tsu02g04995 328 MobiDBLite consensus disorder prediction 173 195 - -
Tsu02g04995 328 MobiDBLite consensus disorder prediction 142 172 - -
Tsu02g04995 328 Coils Coil 147 167 - -
Tsu02g04995 328 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 203 218 IPR004827 GO:0003700|GO:0006355
Tsu02g04995 328 SMART brlzneu 196 260 IPR004827 GO:0003700|GO:0006355
Tsu02g04995 328 PANTHER BASIC LEUCINE ZIPPER 34 1 326 - -
Tsu02g04995 328 MobiDBLite consensus disorder prediction 299 328 - -
Tsu02g04995 328 Gene3D - 199 271 - -
Tsu02g04995 328 CDD bZIP_plant_RF2 201 251 IPR044759 GO:0003700|GO:0006355
Tsu02g04995 328 MobiDBLite consensus disorder prediction 122 141 - -
Tsu02g04995 328 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 326 - -
Tsu02g04995 328 SUPERFAMILY Leucine zipper domain 200 254 IPR046347 GO:0003700|GO:0006355
Tsu02g04995 328 Pfam bZIP transcription factor 200 244 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04995 Tsu-Chr2 58974026 58977164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04995 1 277 bZIP Transcription Factor Family AT3G58120 55.369 1.64e-96 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu02g04995 bZIP_1 3.5e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04995 - - cam:101507538 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04995 02 58974026 58977164 Tsu02g04995 02 58974026 58977164 ECH