Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04983 ATGATTGAACTATTATTCCTCTTCATGCTACTCTTTCTCTCATCAATAATCTCTCCCACTCTCTCTCTCAACCAAGATGGTCTCTTCCTTCTCCAAGCAAAACTCCATCTCTCTGACCCTTCAAACTCTCTCTCCAACTGGTCCCCTAATGACTCCACTCCATGCAACTGGACAGGCATCCTCTGCAACAATCTCACAAACTCAGTCATCTCCATAAACCTCGCTAACTCCGATCTCTCCGGTCCATTTCCCACTTCCCTCTGCCGTCTCCCTTCTCTCTCCCATCTCTCTCTCCCTAACAACAACCTCAACTCCACTCTCCCCACCACCATCTCCACTTGCACCAATCTTCACCATCTTAACCTCTCCCTAAACCTCTTCTCCGGTGAACTTCCAACCACTCTCTCCAACCTCCCTAACCTCAAACAACTCGACCTCTCCTTTAACAACTTCTCCGGTAAAATCCCGTCAACCTTCGGCTTTTTCCGGCAACTTCAATTTCTCTCCCTTGTTAACAATCTTCTCACCGGTAACATACCTTCTTCTCTAAGCAACGTTTCATCTCTCAAAGAACTTCACCTTGCTTACAACAACTTCTTCTCCGAAATTCCAAAAGAATTCGGAAACCTCACCAACCTTGAAACTCTATGGCTTTCCGGTTGCAACCTTGTGGGTCAAATTCCGGTTTCTCTTCGGAAACTCGCTCGCCTTCAAAACCTCGACTTATCCCGGAACATGCTCAACGGAACCATACCGGAACTTATGATTTCCGGTTTAACCAGCATTGTGCAAATTGAGCTTTACCAAAACTCATTCTCCGGCGAGTTACCACGTTCCGGTGTATCGAATTTGACTCATTTGGAACGATTCGATGCTTCTGATAATGAGTTAACAGGAACGATTCCAAACGAGTTGTGTCGTTTGAAGAATCTGGGGTCTCTTCATTTGTACTATAATAAACTCAACGGTTCTCTGCCGGAAAGTTTAGCTTCGTCGGAGAATTTATACGAGCTTCTTCTGTTCAACAACACACTCTCCGGAAAGTTACCGAGTGGCTTGGGAAACAATTCAAAGCTTCAGTTGCTTGATGTTTCGTTTAATCAATTCTCCGGCGAGATTCCGGCGAGATTATGTCGTCAGGGAAATTTACAGGAACTGTTAATGATTCACAATTCATTTTCCGGTGAAATTCCGGCTAGTCTTGGAAACTGTTTGAGCTTAATGAGAGTTAGGTTTGGAAACAATAATCTCTCTGGTTTTGTTCCTTATGGACTTTGGGGTCTACCCCATATGTATCTACTTGAGCTTGTTGAAAATTCTCTTTCTGGGTCAATTTCAAATGCAATTTCAGGTGCAAGTAATCtttcaattttgttaatttcaGGGAATAGGTTTAATGGGTCGATTCCGGAGTCAATCGGGTCGTTGAATAATCTCGGAGAGTTTGTTGCTAGTAGGAATAGTCTTACCGGTCAAATTCCGACCGGTATGGTTAAGTTAAGCCAGTTAGGTAGGCTTGTTCTTAGAGATAATCAATTTTCTGGTGAGATTCCTAATTGGGTTGGTGATTGGAAGAAGATTAATGAGCTTGATTTGGCTAATAATAGGTTTAATGGTAATATTCCAAGTGAATTAGGAACTTTGCCGGGGCTTAATTATCTTGATTTTTCTGGTAATTTACTTTCTGGTGAAATTCCAATGGATTTGCAAAATTtgaaacttgatttttttaatctgtCAAATAATAAGCTTTCTGGTGAAATTCCTCCTCTTTATGATAATCAGAATTATAGGGAAAGTTTTGTAGGCAATACCGGTTTATGTGGTGATCTTTCGGGATTGTGTCCGAATTTGGGTGAGAAGAGTAAGAATAGGAACTTTGTGTGGGTTTTTAGGTTAATATTTGTTCTGGCTGGTGTGGTTTTAGTTGTTGGGGTGGCATGGTTTTACTTCAAATTCCGAAATttcaagaagatgaagaaaggtTTTCGTGTATCGAAGTGGAGATCGTTTCATAAACTCGGGTTTAGTGAGTTTGAGATTGTTAAATTGATGAGTGAAGATAATGTGATAGGGAGTGGATCTTCTGGGAAGGTTTACAAAGTTGTGTTGAGTAATGGAGAGGTAGTAGCAGTGAAGAAATTATGGAGAGCAACTAAGACAGAAAGTGGAAATGTTAATGATcaagaaaaagatgaatttgaagTTGAAGTTGAAACATTAGGAAAGATTAGGCACAAGAATATTGTAAGGTTATGGTGTTGTTATAACAATGGAGATAGTAAACTCTTAGTTTATGAGTATATGCCTAATGGAAGTTTAGATGATTTGTTGCATAGTAGCAAGAAAAACTTGTTGGATTGGCCAATAAGACTTAAAATTGCTGTTGATGCTGCTGAGGGACTTTCTTATTTGCATCATGATTGTGTTGTTCCTATTGTTCATAGGGATGTAAAATCTAGTAATATTTTGATAGATGGTGAATTTGGTGCAAAAATTGCTGATTTTGGAGTTGCTAAATTTGTTAGAGGTGTTAGCAATGGGACAGAAGAGCCTATGTCTATGATTGCTGGATCTTGTGGTTACATTGCACCAGAATATGCTTACACTCTTAGGGTGAATGAAAAGAGTGACATTTATAGCTTTGGTGTAGTGATTTTGGAATTGGTAACTGGAAAACACCCTATTGATCAAGAATATGGAGAAAAAGATTTGGTAAAATGGGTTTCTTCCAAATTGAATGAGGAAGGACATGATCAAGTGATTGATCCAACTCTTGATTCTAAGTATAAGGAAGAAATAAGCAAAGTACTCAACTTGGGGATTCTTTGCACAAGCTCTCTTCCTATAAATCGTCCTTCAATGAGAAGTGTAGTGAAAATGCTGCAGGAAGTAAAAGCAGTTGCTATATCTAGAAGTGGAAAATTCTCTCCTTATTATCAAGAAGTAGTCTTTGAAAATGATCATTAG 2970 0.3872 MIELLFLFMLLFLSSIISPTLSLNQDGLFLLQAKLHLSDPSNSLSNWSPNDSTPCNWTGILCNNLTNSVISINLANSDLSGPFPTSLCRLPSLSHLSLPNNNLNSTLPTTISTCTNLHHLNLSLNLFSGELPTTLSNLPNLKQLDLSFNNFSGKIPSTFGFFRQLQFLSLVNNLLTGNIPSSLSNVSSLKELHLAYNNFFSEIPKEFGNLTNLETLWLSGCNLVGQIPVSLRKLARLQNLDLSRNMLNGTIPELMISGLTSIVQIELYQNSFSGELPRSGVSNLTHLERFDASDNELTGTIPNELCRLKNLGSLHLYYNKLNGSLPESLASSENLYELLLFNNTLSGKLPSGLGNNSKLQLLDVSFNQFSGEIPARLCRQGNLQELLMIHNSFSGEIPASLGNCLSLMRVRFGNNNLSGFVPYGLWGLPHMYLLELVENSLSGSISNAISGASNLSILLISGNRFNGSIPESIGSLNNLGEFVASRNSLTGQIPTGMVKLSQLGRLVLRDNQFSGEIPNWVGDWKKINELDLANNRFNGNIPSELGTLPGLNYLDFSGNLLSGEIPMDLQNLKLDFFNLSNNKLSGEIPPLYDNQNYRESFVGNTGLCGDLSGLCPNLGEKSKNRNFVWVFRLIFVLAGVVLVVGVAWFYFKFRNFKKMKKGFRVSKWRSFHKLGFSEFEIVKLMSEDNVIGSGSSGKVYKVVLSNGEVVAVKKLWRATKTESGNVNDQEKDEFEVEVETLGKIRHKNIVRLWCCYNNGDSKLLVYEYMPNGSLDDLLHSSKKNLLDWPIRLKIAVDAAEGLSYLHHDCVVPIVHRDVKSSNILIDGEFGAKIADFGVAKFVRGVSNGTEEPMSMIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGKHPIDQEYGEKDLVKWVSSKLNEEGHDQVIDPTLDSKYKEEISKVLNLGILCTSSLPINRPSMRSVVKMLQEVKAVAISRSGKFSPYYQEVVFENDH 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04983 989 Gene3D Phosphorylase Kinase; domain 1 668 768 - -
Tsu02g04983 989 ProSitePatterns Serine/Threonine protein kinases active-site signature. 813 825 IPR008271 GO:0004672|GO:0006468
Tsu02g04983 989 ProSitePatterns Protein kinases ATP-binding region signature. 691 714 IPR017441 GO:0005524
Tsu02g04983 989 Gene3D Transferase(Phosphotransferase) domain 1 769 976 - -
Tsu02g04983 989 ProSiteProfiles Protein kinase domain profile. 685 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04983 989 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 4 975 - -
Tsu02g04983 989 Gene3D Ribonuclease Inhibitor 259 617 IPR032675 -
Tsu02g04983 989 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Tsu02g04983 989 SMART LRR_typ_2 500 524 IPR003591 -
Tsu02g04983 989 SMART LRR_typ_2 210 233 IPR003591 -
Tsu02g04983 989 SMART LRR_typ_2 138 161 IPR003591 -
Tsu02g04983 989 SMART LRR_typ_2 308 332 IPR003591 -
Tsu02g04983 989 SMART LRR_typ_2 90 114 IPR003591 -
Tsu02g04983 989 SMART LRR_typ_2 186 209 IPR003591 -
Tsu02g04983 989 SMART LRR_typ_2 234 258 IPR003591 -
Tsu02g04983 989 SUPERFAMILY L domain-like 325 597 - -
Tsu02g04983 989 SUPERFAMILY Protein kinase-like (PK-like) 685 962 IPR011009 -
Tsu02g04983 989 SMART serkin_6 685 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04983 989 Pfam Leucine rich repeat 91 151 IPR001611 GO:0005515
Tsu02g04983 989 Gene3D Ribonuclease Inhibitor 174 258 IPR032675 -
Tsu02g04983 989 Gene3D Ribonuclease Inhibitor 22 173 IPR032675 -
Tsu02g04983 989 Pfam Protein kinase domain 687 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04983 989 Pfam Leucine Rich repeats (2 copies) 188 227 IPR025875 -
Tsu02g04983 989 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 4 975 - -
Tsu02g04983 989 SUPERFAMILY RNI-like 71 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04983 Tsu-Chr2 58893604 58897052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04983 19 982 Receptor kinase-like Gene Family AT1G28440 59.410 0.0 1132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tsu02g04983 Pkinase 8.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04983 - - gmx:100778128 1281.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04983 02 58893604 58897052 Tsu02g04983 02 58893604 58897052 ECH