Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04960 ATGGCTATGATGAAGgctaattttgttttgattatgtCAATGACCATTCTTAGTTTTTCATTGTCATATGGTTACAAATTTAACGTTGGTGGCAAAGATGGTTGGGCAGTCAAACCTTCTCAATGGTATGGTCAATGGGCTGAGGAAAATAGGTTCCAAATCAACGACACACTTTATTTTAAGTACAACAAAGGATCTGATTCAGTGTTGGTGGTAAGCAAAGAAGACTATTACTCATGCAACATAGGAAATCCGATCCAGAAATTGGACGGTGGAGATTCAACTTTCACATTTGACAAATCAGGTCCTTTTTTCTTCATTAGTGGAAACGTTGAAAATTGCAAAAAGGGTCAGAAGTTGATCGTTGTTGTTTTGTCACCAAATCATCATCGCAAACAAGGTCCATCAGCATCACCTCCATCATGGAATGCTCCTTCACCGGCATGGACTCCAGCATGTACACCTAAATCAAATGCTCCTTCACCTTCCTGGAAGGTTCCTTCACCGGCATTGACACCTAAGTCAAATGCCCCTTCACCGGCATGGACTCCCGCTTGGACACCTAAATCGAATGCTCCTTCACCAACATGGAAGGCTCCTTCCCCGGCATGGACTCCAGCATGGACACCTAAATCAAATGCTCCTTCACCAACATCGAAGGCTCCTACACCTGCGAGTACACCCGCATGGACACCTACACCTAATGCTCCTTCACCAAAATCGAAGACTCCTACACCGGCATGGACACCTACACCTAATGCTCCTTCACCAAAATCGGATGCTCCTACACCAGCAAGTACACCAGCATGGACACCTACACCTAATGCTCCTTCACCGGCAACGACTCCAGCATCGACACCTACATCAAATGCTCCTACACCAGCATGGACACCATCATCGGATGCTCCTTCACCAAGTGCTACCGGCGGGGAATCTCCGGCTCCATCTCCTGCTCATTCGGGTTCTACTAGATCCAGTGGATTTGGTGTTGGATTTGTGGCTGCCTTGATCATTGGATGCTTTGttatttaa 1032 0.4545 MAMMKANFVLIMSMTILSFSLSYGYKFNVGGKDGWAVKPSQWYGQWAEENRFQINDTLYFKYNKGSDSVLVVSKEDYYSCNIGNPIQKLDGGDSTFTFDKSGPFFFISGNVENCKKGQKLIVVVLSPNHHRKQGPSASPPSWNAPSPAWTPACTPKSNAPSPSWKVPSPALTPKSNAPSPAWTPAWTPKSNAPSPTWKAPSPAWTPAWTPKSNAPSPTSKAPTPASTPAWTPTPNAPSPKSKTPTPAWTPTPNAPSPKSDAPTPASTPAWTPTPNAPSPATTPASTPTSNAPTPAWTPSSDAPSPSATGGESPAPSPAHSGSTRSSGFGVGFVAALIIGCFVI 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04960 343 MobiDBLite consensus disorder prediction 147 198 - -
Tsu02g04960 343 CDD OsENODL1_like 25 125 IPR041846 -
Tsu02g04960 343 PANTHER BLUE COPPER PROTEIN 3 206 IPR039391 GO:0009055
Tsu02g04960 343 ProSiteProfiles Phytocyanin domain profile. 25 126 IPR003245 GO:0009055
Tsu02g04960 343 MobiDBLite consensus disorder prediction 206 226 - -
Tsu02g04960 343 MobiDBLite consensus disorder prediction 282 327 - -
Tsu02g04960 343 MobiDBLite consensus disorder prediction 227 281 - -
Tsu02g04960 343 MobiDBLite consensus disorder prediction 129 327 - -
Tsu02g04960 343 SUPERFAMILY Cupredoxins 24 125 IPR008972 -
Tsu02g04960 343 Gene3D - 25 136 IPR008972 -
Tsu02g04960 343 Pfam Plastocyanin-like domain 35 118 IPR003245 GO:0009055
Tsu02g04960 343 PANTHER EARLY NODULIN-LIKE PROTEIN 2 3 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04960 Tsu-Chr2 58706577 58708077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04960 3 170 Phytocyanin Superfamily AT4G28365 47.977 1.79e-49 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04960 - - mtr:MTR_2g090575 227.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04960 02 58706577 58708077 Tsu02g02892 02 31791335 31792121 PCT