Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04946 ATGGCATCAGGTCCATCAATTCACGGTAACTACATCTCCGAGGGACATGGTTCCGATGATATTTTTTGTCCATACGATGATTATACAAACGAGGATTCTTCTTGTGCTACTCACATCGATTCTAGTAAGGATTTTCACATTTCAAGGATGGCAAAAACATCAACATTTCCTACTTCTGTCATTAATTCATCTGAAGGTTCTTTAAGCCAAGATATTATTGCAATAACTGTTGAGAAAAGTATGAAAGCATGTACCGACAACCTTATGCGGTTTCTTGAGGGAATTAGTTCAAGGTTATCGCAATTGGAATTATATTGTTACAATCTTGACAAATCAATCGGAGAAATGAGATCCGAGTTAGCTAGTGATCACGAGGAGGCAGATTTAAAACTCAAATCTCTTGACAAACACATCCACGAAGTACATAGGTCACTACAAATTTTAAGAGACAAGCAAGAGCTAGTTGAGACTCAGAAAGAATTAGCCAAACTTCAACTTGCTCGGAAAGGATCAACTTCCTCATGCCACTCACAGCCAAATGAGGAGAAATTTTCCCCTCCTGCTTCCATAGAACAGAAAAGAACTGATAATGCATCTCCTACATCATCTGATCCACATAACCAGCAGCTAGCTCTTGCCCTTTCTCATCAAGTTGCCTTCCAGCAACCGCCTATACCCCCATCATCTCGAGCTCCATCCCCAAATGTGACCCAAACCACGCAACAACCTCATTATTACATGATGCATGCGCCTTCACCCAACCCGCCAGCCACATCACAACTTCCTCAGAATCAGTATTTTCCTACTGATCCACAGTATCAATATCATCATCCACCAACATCGTCGCAAGTAACCCAGTCCCTGACTGCACAACAATTTTCTCAGTATCAGCAGCCacaacagcagcagcaacaacagcaGCAATGGCCTCAGCAGGTACAACCTCTGCAACCACCCTCAATGCACTCTCAAATGAAACCTCCATCAGTAAATGCTTACGCTCCGTATCTTACAAGCCAAGCTTCAAGTCCACTTCCCACTGACACATTGTCGAACAGCATGCCAATTCAAAAGCCATATTCAGGGATACTGCCGCAAATCAAGGGCCATTATCCATCCCAACCAGGTAATCTATATGGAACTAGTGGGGTCCATGCCACACCTCCTCCTGCTAGCGCATACATGATGAATGAAAGTGAGGGTGGCAGAGTTAATTACCCTCCGCAACCTTCTCAATCTGCTCAAGGTGCATATCCTCCTCAAAGTGCTTCCCTTCAGAATCCTGCATCGCATAATCTAACAGTCAGAAATCCTAGTCAGCCACAACTTGTCCGCAGCCATCCTTACAATGAGTTGATTGAGAATTTGGTGAATATGGGAGTTAGAGGCGATCTTGTGGTAAGCATTATTCAGAGGTTGGAGGAAACTGGACAGCCTGTAAATTTTAACTCTGTACTTGACAGGTTGAATGTACATAGTTCATTGGGTCCCCAGAGGGGATGGTCAGGGTGA 1512 0.4299 MASGPSIHGNYISEGHGSDDIFCPYDDYTNEDSSCATHIDSSKDFHISRMAKTSTFPTSVINSSEGSLSQDIIAITVEKSMKACTDNLMRFLEGISSRLSQLELYCYNLDKSIGEMRSELASDHEEADLKLKSLDKHIHEVHRSLQILRDKQELVETQKELAKLQLARKGSTSSCHSQPNEEKFSPPASIEQKRTDNASPTSSDPHNQQLALALSHQVAFQQPPIPPSSRAPSPNVTQTTQQPHYYMMHAPSPNPPATSQLPQNQYFPTDPQYQYHHPPTSSQVTQSLTAQQFSQYQQPQQQQQQQQQWPQQVQPLQPPSMHSQMKPPSVNAYAPYLTSQASSPLPTDTLSNSMPIQKPYSGILPQIKGHYPSQPGNLYGTSGVHATPPPASAYMMNESEGGRVNYPPQPSQSAQGAYPPQSASLQNPASHNLTVRNPSQPQLVRSHPYNELIENLVNMGVRGDLVVSIIQRLEETGQPVNFNSVLDRLNVHSSLGPQRGWSG 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04946 503 MobiDBLite consensus disorder prediction 167 208 - -
Tsu02g04946 503 MobiDBLite consensus disorder prediction 365 443 - -
Tsu02g04946 503 MobiDBLite consensus disorder prediction 220 239 - -
Tsu02g04946 503 MobiDBLite consensus disorder prediction 246 331 - -
Tsu02g04946 503 MobiDBLite consensus disorder prediction 259 331 - -
Tsu02g04946 503 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 366 - -
Tsu02g04946 503 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 365 501 - -
Tsu02g04946 503 MobiDBLite consensus disorder prediction 404 443 - -
Tsu02g04946 503 MobiDBLite consensus disorder prediction 165 208 - -
Tsu02g04946 503 Coils Coil 147 167 - -
Tsu02g04946 503 Pfam UBA-like domain (DUF1421) 449 493 IPR010820 -
Tsu02g04946 503 PANTHER FORMIN-LIKE PROTEIN (DUF1421) 1 366 - -
Tsu02g04946 503 PANTHER FORMIN-LIKE PROTEIN (DUF1421) 365 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04946 Tsu-Chr2 58483246 58486263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04946 57 192 Trihelix Transcription Factor Family AT5G14540 33.088 3.07e-20 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04946 - - aip:107610486 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04946 02 58483246 58486263 Tsu02g04946 02 58483246 58486263 ECH