Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04937 ATGTCTTTCCCAATGCTTCAACTTAAGCAACTTCTCATTCTTCTTCACACTGTAACCATAATTATATGTTGTGTTTCCACTACTGAATTTGTCTATAATACAAACTTCAACTCCACAAGCATTAGCCTATATGGAAATGCAACCATTCAAAATTCCATTCTCACTCTCACTAATGGAACTTATTTCTCTATAGGTCGTGCTTTTTACCCTCAAAAAGTACCAACCAAATCATCCAACTCTTCCACTATTCTTCCCTTTGCTACTTCGTTCATTTTCTCTGTTGCCCCCATCAAAAACATTATCACAGGACATGGTTTTGCCTTCATATTCACACCTTCAAGAGGCCTAAATGGAACAACATCAAACGAGTATATCGGTCTCTTCAATTTGACCAATGAAGGTAATCCTAACAACCATGTTTTTGGAGTTGAATTTGATATCATTAGAAACGAAGAATTCAACGATACAAATGGTAATCATATTGGTATCGATGTAAACTCGCTTAAATCATTAACTTCAGATGAGGCTGGCTACTGGGGTGGAAAATATGACAATGAGTTTAAGGTGTTGAACATTAAAAGTGGAGAAAATTATCAAGTATGGATTGAATATATGCACTCAAAGATAAACGTTACAATGGCTCGGGCAGGACAAAAGAGGCCTCAAGTTCCTCTCATCAGTATGAATGTTAACCTTTCTGAGGTTCTTGTGGACGAAACATACGTTGGATTCAGTGCAGCCACAGGGCAAATAGTAGACACATGTAAGATTCTTGCTTGGAGCTTTAGTAATACAAATTTTTCAATTGGTGATGCTTTAGTGACAGACAACTTGCCATCATTTATTCCTCATAAAGGATGGTTTTCTAGAGCAAAATCTATAGTTTTAGGGGTCATCAGTGTCGTTTTTGTCTTAGTCATTGGTTGCAGTTGTATAGTGGTTTTTATCCTATATAAGGGAGAGGATGAAACTGAAGAGTGGGAACTAGAGTATTGGCCACATAGAATTAGTTTCCAAGAGATTCAAGAAGCTACAAGAGGATTCTGTGAAGAGAATGTGGTTGCTATAGGAGGGAACAAAAGTGTATATAAAGGGATTTTGCATGGAGTTGAAGTCGCAGTTAAGAGAATCCCTCAAGAAAGTAAAGGAATGAGAGAGTTTTTGGCAGAGGTTTCAAGCCTAGGAAGATTGAAACATAGACGTTTAGTAGGATTTAGAGGTTggtgcaaaaaagaaaaaggaaacttGATACTAGTTTATGACTTCATGAACAATGGAAGTTTAGACAAATGGATCTTTGAGTGTGAAGAAGGAAAGATGCTAACATGGGAAGAGAGGAttcaagttttaaaaaatgtagCCGCGGGGATTCTATACCTGCACGAAGGTTGGGAAGTTAAGGTATTGCATAGGGATATTAAAGCAAGTAATGTTTTACTTGACAAGGACATGAATGCTAGATTGGGGGATTTTGGATTGGCTCTTATGCATGAGCATCATGGACATGTTGCTAGCACAACGAAAGTACTAGGGACATTAGGATACATTGCTCCGGAAGTGATTCGGACAGGAAGAGCGTCGACTATGTCTGATGTGTTTGGTTTTGGAATATTGGTGTTAGAAGTAATTTGCGGGCGAAGACCTATTGAAGAACATAAACCAGGACTAATTGAATGGGTGGAGTCCCTAACGGTGCTTGGCCAATTGCACAACGCTGTTGATGAAAGGTTGAAGGCTAAAGGAGGATACGCTATTGAAGAAGCAGAGAGATTACTTCATTTGGGTTTGTTCTGTTCAAATTCAGACCCTAGTGTTAGACCAATAATGAGACAGGTTGTGAAAATGTTGGAGGGAGAAATGTATATCACTGAATCTGATGAAGAAAATATGGAGAAAGGCTTACTTCGAAGAATAAAATCGGCTGCAATGTGGACTAGAACTGAAAGTGGACTTCGATACACAGATCACCCTACTTTTGAAGATATTAAAATGTTTAGTTATAACTCTGAGAGGACTACAAGTGGCTCAAGTTCCATTCCACAAGGATCACAATCAGAATCAAATTCAGATATCATTCGGGAAAGCTGGCAATGTTGTAGATTTTAG 2106 0.3765 MSFPMLQLKQLLILLHTVTIIICCVSTTEFVYNTNFNSTSISLYGNATIQNSILTLTNGTYFSIGRAFYPQKVPTKSSNSSTILPFATSFIFSVAPIKNIITGHGFAFIFTPSRGLNGTTSNEYIGLFNLTNEGNPNNHVFGVEFDIIRNEEFNDTNGNHIGIDVNSLKSLTSDEAGYWGGKYDNEFKVLNIKSGENYQVWIEYMHSKINVTMARAGQKRPQVPLISMNVNLSEVLVDETYVGFSAATGQIVDTCKILAWSFSNTNFSIGDALVTDNLPSFIPHKGWFSRAKSIVLGVISVVFVLVIGCSCIVVFILYKGEDETEEWELEYWPHRISFQEIQEATRGFCEENVVAIGGNKSVYKGILHGVEVAVKRIPQESKGMREFLAEVSSLGRLKHRRLVGFRGWCKKEKGNLILVYDFMNNGSLDKWIFECEEGKMLTWEERIQVLKNVAAGILYLHEGWEVKVLHRDIKASNVLLDKDMNARLGDFGLALMHEHHGHVASTTKVLGTLGYIAPEVIRTGRASTMSDVFGFGILVLEVICGRRPIEEHKPGLIEWVESLTVLGQLHNAVDERLKAKGGYAIEEAERLLHLGLFCSNSDPSVRPIMRQVVKMLEGEMYITESDEENMEKGLLRRIKSAAMWTRTESGLRYTDHPTFEDIKMFSYNSERTTSGSSSIPQGSQSESNSDIIRESWQCCRF 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04937 701 Pfam Legume lectin domain 28 266 IPR001220 GO:0030246
Tsu02g04937 701 PANTHER LECTIN RECEPTOR KINASE 5 676 - -
Tsu02g04937 701 Gene3D - 26 274 - -
Tsu02g04937 701 PANTHER - 5 676 - -
Tsu02g04937 701 CDD lectin_legume_LecRK_Arcelin_ConA 28 265 IPR001220 GO:0030246
Tsu02g04937 701 MobiDBLite consensus disorder prediction 670 690 - -
Tsu02g04937 701 CDD STKc_IRAK 357 618 - -
Tsu02g04937 701 SUPERFAMILY Protein kinase-like (PK-like) 326 617 IPR011009 -
Tsu02g04937 701 SMART serkin_6 348 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04937 701 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 265 IPR013320 -
Tsu02g04937 701 Pfam Protein kinase domain 356 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04937 701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Tsu02g04937 701 ProSiteProfiles Protein kinase domain profile. 348 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04937 701 Gene3D Phosphorylase Kinase; domain 1 317 422 - -
Tsu02g04937 701 Gene3D Transferase(Phosphotransferase) domain 1 423 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04937 Tsu-Chr2 58397632 58399737 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04937 25 563 Receptor kinase-like Gene Family AT4G04960 56.727 0.0 606
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tsu02g04937 Pkinase 6.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04937 - - mtr:MTR_2g090410 1060.06