Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04927 ATGGGGTGCTGTTTATCGACAAGCAGTAGAAGTACTGATGACGCGGGGTCTTCGTCTTGTCTAGAAATCGGATTGTGTGGTCAAAAGAAAGCGAGGAGAACATTCTCTGATCATGTTGTCTCTTTGCAAAAGTTAACATCCTTACCTAACAGAATATTCAGTAACGGGAAGAGCCGGTCTTCTTGTATATTTACTCAGCAGGGTCGAAAAGGTGTTAATCAGGATGCCATGATTGTATGGGAAGATTTCGTATCAGAAGATGCGATCTTTTGTGGTGTATTTGATGGCCATGGTCCGTATGGTCACCTTGTCGCACGCAAAGTTAGGGATGCCTTGCCGATAAAATTGCTTTCATTTTTGGATTCATCTGAGTCAAGACGAAGTAAAGCTAGTTTCAAAAAGGAAATAAAGCCTGAAAGTGGAGAGGCGGAGCAGGATTTCTCGGCTGAGGAGGAGGTGAGTACTATGTGGAGAGAAGCTTTCATGAAGGCATACAAGGCTATGGATAAAGAGCTGAAGTCTCATGCAAATTTGGACTGTTTCTGTAGTGGAAGCACATCTGTGACTATAGTGAAACAGGGTTCAAATTTGTTCATGGGAAATATTGGTGATTCAAGAGCAATCATGGGATCTAAGGATAGTAATGACTTGATGGTAGCGATTCAGCTGACTGTTGATTTGAAACCTGATTTGCCAAGAGAAGCAGAAAGAATTAAGAAGTGCAAGGGTAGGGTATTTGCATTGGAAGATGAACCAGAAGTTCCTAGGGTGTGGTTACCATTTGATGATGCACCTGGATTAGCAATGGCTAGAGCATTTGGAGATTTTTGCTTGAAGGAGTATGGTGTGATTTCTATACCTGAATTTACGCACCGGCTTCTTACAGATAAAGACCAGTTCATTGTTCTTGCCTCGGACGGGGTCTGGGATGTTTTGAGCAATGAAGAGGTGGTGGAGATAGTATCATCAGCACCGAGTCGATCATCAGCAGCGAGGGTTATAGTGGAATCTGCCGCACGAGAGTGGAAACATAAATATCCGACTTCAAAAATGGACGATTGTGCTGTTGTGTGCCTATTTTTGGATGGAAAAATGAACTCAGAAGAATCTGACTGTGATGAACAATGCTATTCTTCCGCAACCATCCAGACCAACAACGATTTAGGTAATCCAGTTGAGTCGGACGAAGGTCAAAAGTCCGAGCCATCTTTGCGAAGGAACTACACTGTGAGATCCACAGAAGGAATTGAGAGATGTGTAGGAGGAGAATCTGTTAATGTTGAAGATGGAACATCAACTGCTGAAGAACAAAGCTGGTTAGGTCTAGAAGGTGTCACCCGAGTAAACTCACTGGTACAACTTCCTAGATTCTCTGAAGAAAAGCCTAattcttga 1395 0.428 MGCCLSTSSRSTDDAGSSSCLEIGLCGQKKARRTFSDHVVSLQKLTSLPNRIFSNGKSRSSCIFTQQGRKGVNQDAMIVWEDFVSEDAIFCGVFDGHGPYGHLVARKVRDALPIKLLSFLDSSESRRSKASFKKEIKPESGEAEQDFSAEEEVSTMWREAFMKAYKAMDKELKSHANLDCFCSGSTSVTIVKQGSNLFMGNIGDSRAIMGSKDSNDLMVAIQLTVDLKPDLPREAERIKKCKGRVFALEDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFTHRLLTDKDQFIVLASDGVWDVLSNEEVVEIVSSAPSRSSAARVIVESAAREWKHKYPTSKMDDCAVVCLFLDGKMNSEESDCDEQCYSSATIQTNNDLGNPVESDEGQKSEPSLRRNYTVRSTEGIERCVGGESVNVEDGTSTAEEQSWLGLEGVTRVNSLVQLPRFSEEKPNS 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04927 464 MobiDBLite consensus disorder prediction 383 406 - -
Tsu02g04927 464 PANTHER ALPHABET, ISOFORM E-RELATED 1 452 - -
Tsu02g04927 464 Gene3D - 50 363 IPR036457 -
Tsu02g04927 464 Pfam Protein phosphatase 2C 109 338 IPR001932 -
Tsu02g04927 464 SUPERFAMILY PP2C-like 49 363 IPR036457 -
Tsu02g04927 464 MobiDBLite consensus disorder prediction 130 144 - -
Tsu02g04927 464 MobiDBLite consensus disorder prediction 130 149 - -
Tsu02g04927 464 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 452 - -
Tsu02g04927 464 CDD PP2Cc 59 361 IPR001932 -
Tsu02g04927 464 SMART PP2C_4 49 359 IPR001932 -
Tsu02g04927 464 ProSiteProfiles PPM-type phosphatase domain profile. 60 361 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04927 Tsu-Chr2 58287996 58291505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04927 1 464 PP2C-type Phosphatase Gene Family AT1G03590 67.234 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04927 - - gmx:100788149 749.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04927 02 58287996 58291505 Tsu02g04927 02 58287996 58291505 ECH
Tsu02g04927 02 58287996 58291505 Tsu06g01106 06 10043521 10048710 PCT