Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04915 ATGGTCCAATTACATATTCCAAGTGTGATTCATGATGGTATTGCTGCTAGTTTGAAGGATGTCATTGATAGCGGATATGATTTGTTTGAGCCTTATGTTAACTCATCCTATGTTGCAATAAGAAGGGATCTTATAGTCAAACAAAGACTCGTTAAAGATTTGATTGTGGCAATAATTATTTGGACGAAATCAGTACCAATTGAAGCAATTTTTGGTATATTGGCTGATATCACAAATGTTGAAAttctcttctttgatgtccaaACACTTGTTGTGGTTGCAGTGACTCTATCAACTCCAATTTTTAATGCATCTCTAGATAAAAAGATGAAGAAGGTTTTGTCAACCAAGGCTCAAATCTTGTACACTGAGGACATGACAGGTTTGCCATTTTGGAGCCCTACTTTGAATATGCTTTATCACTCAAGGTGGGATTATTTCCAAGATACCAAATTAAAGGACCATTGGTTGCTAGTGTCTCAACATTTTGTGCAATATGTTTTGAATGAGAAATTTTTATCATTTGCATTTTTCATGAACTGTGTTGTTATTGAGATTTCTTCAAATGCTagggattttttcaaatatgATGCTAGTAATTGGGTGCTGTGCATAGTTAATTGTGATAGCTATCCTTTTAGGCTGAAAGTAACAACTCTGAATGTGAAGCTATGGAGTAGTACTACCATGGTGCTCAATCTAATTTTCTATGAGGAATTTTTGAAATTGGAACATGTATTTGATTTGAGGGTATTCTTGAGAAGAAAATGCCTTACTGGATATCTTTTGCAATGTACACTACTACACCTTGATCTTGAGGACAAGATCGTTTTTAGGGAAGGTGGTAATGATATGATTTATGATGGTTGGTTTCAATCTTTGAAGACTATGATACTCTACAATGTGGGAATCATTGGTAACAACAAGGTTGTTGAAGttaaaaaattggaaaagaCTAGGCATAAGAGGATTATTAGGTTATGTTATTACTACAACTCTGATAATAATAAGCTCCCCGTCTATGAATATATCCAAAATGAGAACTTGACTGATACATGGAATGGCAAGAAGAGCTTATTAGATTGGCACTATAATTGTGTACCACCTATTGTTCATAAGCACATAATATCTAACAGAGTGCCTAAAGGAGGGTTTCAGAGAAAAGCAGCAGGAATAGGAATTTCCAAAACTGCTACCTTTATAAGTAAAGGGGTGGAATCCATTTATGTGACTATGAGATCTTATGGCTATGTTGCAATGgagggaaagaaaaaaaatgggatCCCGGTAGACATTTGGCGATGTGTAGAAGAGTTTTGTCCTTCAAGTTCAAGCAATGGGATTCAAGTAAAATTCGTGTTGTGGGCAATTTTTGCAACCTTGAGgataaagttgattttgaagggCTTTTTTCCTTACTTTCTTCACCTTTTTCTTAAGTTGATGATTAAGTTTTCACTTGCAGCTACTAATCCTTCTGATGTTGCTGCAATTAATAGATTATATGCTGCATTGGGCAACCCTGTTCTTCCTGGGTGGGTTGCTAGTGCGGGAGACCCATGCGGAGAAGCGTGGCAAGGCGTTCAATGTAATGATTCACAAATACAAGAAATAACTCTAATTGGTGCAAATTTGGGAGGAGAACTTGGCGATAGCTTGGGAACATTTACTTCTATCAAATCAATATCTCTAAGCAACAACCACATTGGAGGAATTATTCCAACAAGTTTGCCAGCTACCTTGCAAACGCTTTTTCTTTCGGGTAACCAGTTGACCGGAAGTATTCCACCCACTTTATCCACATTGACAGAACTTACTGCTTTGTCTCTTAATGATAATCAGTTAACTGGAGAAATACCAGATGCTTTTCAGTCTCTTACGCAATTGACCAATCTAGATTTATCGCATAATAATTTGAGTGGAGAATTGCCTCCATCTACAGAGAATTTGTCAGCTGTGACGACTTTAGATTTACAGAACAACAACCTGTCTGGGACACTCGATGTTTTACAAGACCTTCCGTTGACAGATTTGAATGTTGAGAACAACCAGTTTTCTGGACCAATACCTCCAAAGTTGTTAAGCATCACCAACTTCAGAAAAGATGGAAACCAATTTGACCTTACTGGTAATGATACTATAGCTCCATCTCGTCCACCTCATTCTCCAGTTACAGCATCACCATCAGGAACTGTGATTCCTGGGACGCCATCTTCTGGACGTGTACCTAGTGGACGTGTACCTAGTGGGCGTGTACCTACTAGACCAGCTGATGGACCAACTGCATCAAAAGAATCAAGTTCCGGGAAATCGAAAAAGAACACCAAAAGAGTGATTTGGATAACTATTTCTGGTGTATTGGGATTTATAATCTTGGCACTAGCACTTGTTCTCTTTCTTCCAAGATGTAGCAAAAGGGAACGAGGCGGAAGAACCTCCAAGCACCATCAGATTGGAGCATATGGAGGCGAAAGAACGAATCCTTGGAATAATGGGGCACTAGTTCAACCACCTAGTCAAATTGAGAAAGTACCAAAAGTGGCTGTTGCAAGGCCAAAAGAAAATCCTCGAGTAGTGAAAGATGAACCAAAAATGGAAACACTGCCGAAGCTATTAAGTCATAATATAGATATGAGTGCACTAGATGTAGATTCAATGCCACCTTCACCCccacctcctcctcctccacctcCTGCTCCAACACTTTCTGCCGAGAAGGTGATTGTCGAGCCAACCACATCCGCTGGAGGGGCTAACATCAATCCTTCCAAAAGAAGTTCTTTTCTTCCCACATTTGCAAAATCTTTCACCATTGCATCTCTTCAGCAGTATACAAATAGCTTTTCTCAAGACAATCTTATAGGATTAGGCATGTTGGGGAGTGTATATAGAGCTGAGCTTCCGAATGGGAAGATACTTGCTGTGAAGAAACTAGACAAGAGAGTTTCCGATCACCAAGAAGATGATGAGTTTCTTGAATTGGTAAACAATATCGACAGACTTCGGCATGCAAATATTGTCGAGCTTATCGGGTACTGTGTAGAACATGGACAAAGGCTTCTGATCTTTGAATACTGCAGTAATGGGTCGATGTATGAAGCACTTCATTCAGATGATGAATTCAAAACAACACTGTCTTGGAATGCTCGCATTCGGATAGCACTTGGAGCAGCCAGAGCCTTAGAGTACTTGCATGAGCAATGTCAGCCACCTGTTATACACAGAAATTTCAAGTCTGCTAACATTCTCCTCGATGAAGATCTATCCGTGCGTGTATCTGATTGTGGTTTGGCTCCATTAATAACTAAAGGCTCCGTACGTCAGCTTTCAGGACAGCTGCTAGCAGCGTATGGCTATGGGGCTCCCGAATTTGAGTCAGGAATTTATACCTACCAAAGTGATGTGTACAGCTTTGGAGTAGTTATGTTAGAACTTTTGACTGGTCGTCAGTCCTATGACAGGAAACGCCCTCGAGGTGAGCAGTTTCTTGTAAGATGGGCAATTACTCAACTTCATGACATTGATGCATTATCAAGGATGGTTGACCCTTCTCTAAATGGAGCTTACCCAGCCAAATCTTTGTCAAATTTCGCCGACATTATTTCTAGATGTGTTCAGTCCGAGCCGGAATTTAGGCCAGCAATGTCCGAGGTTGTCTTGTACTTGCTAAATATGATAAGGAGGGAGTCTCaacaaaatgaatcaaatgaaAGATGA 3717 0.3834 MVQLHIPSVIHDGIAASLKDVIDSGYDLFEPYVNSSYVAIRRDLIVKQRLVKDLIVAIIIWTKSVPIEAIFGILADITNVEILFFDVQTLVVVAVTLSTPIFNASLDKKMKKVLSTKAQILYTEDMTGLPFWSPTLNMLYHSRWDYFQDTKLKDHWLLVSQHFVQYVLNEKFLSFAFFMNCVVIEISSNARDFFKYDASNWVLCIVNCDSYPFRLKVTTLNVKLWSSTTMVLNLIFYEEFLKLEHVFDLRVFLRRKCLTGYLLQCTLLHLDLEDKIVFREGGNDMIYDGWFQSLKTMILYNVGIIGNNKVVEVKKLEKTRHKRIIRLCYYYNSDNNKLPVYEYIQNENLTDTWNGKKSLLDWHYNCVPPIVHKHIISNRVPKGGFQRKAAGIGISKTATFISKGVESIYVTMRSYGYVAMEGKKKNGIPVDIWRCVEEFCPSSSSNGIQVKFVLWAIFATLRIKLILKGFFPYFLHLFLKLMIKFSLAATNPSDVAAINRLYAALGNPVLPGWVASAGDPCGEAWQGVQCNDSQIQEITLIGANLGGELGDSLGTFTSIKSISLSNNHIGGIIPTSLPATLQTLFLSGNQLTGSIPPTLSTLTELTALSLNDNQLTGEIPDAFQSLTQLTNLDLSHNNLSGELPPSTENLSAVTTLDLQNNNLSGTLDVLQDLPLTDLNVENNQFSGPIPPKLLSITNFRKDGNQFDLTGNDTIAPSRPPHSPVTASPSGTVIPGTPSSGRVPSGRVPSGRVPTRPADGPTASKESSSGKSKKNTKRVIWITISGVLGFIILALALVLFLPRCSKRERGGRTSKHHQIGAYGGERTNPWNNGALVQPPSQIEKVPKVAVARPKENPRVVKDEPKMETLPKLLSHNIDMSALDVDSMPPSPPPPPPPPPAPTLSAEKVIVEPTTSAGGANINPSKRSSFLPTFAKSFTIASLQQYTNSFSQDNLIGLGMLGSVYRAELPNGKILAVKKLDKRVSDHQEDDEFLELVNNIDRLRHANIVELIGYCVEHGQRLLIFEYCSNGSMYEALHSDDEFKTTLSWNARIRIALGAARALEYLHEQCQPPVIHRNFKSANILLDEDLSVRVSDCGLAPLITKGSVRQLSGQLLAAYGYGAPEFESGIYTYQSDVYSFGVVMLELLTGRQSYDRKRPRGEQFLVRWAITQLHDIDALSRMVDPSLNGAYPAKSLSNFADIISRCVQSEPEFRPAMSEVVLYLLNMIRRESQQNESNER 1238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04915 1238 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 478 1237 - -
Tsu02g04915 1238 ProSiteProfiles Protein kinase domain profile. 948 1222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04915 1238 ProSiteProfiles Leucine-rich repeat profile. 628 650 IPR001611 GO:0005515
Tsu02g04915 1238 MobiDBLite consensus disorder prediction 705 774 - -
Tsu02g04915 1238 SUPERFAMILY Protein kinase-like (PK-like) 294 433 IPR011009 -
Tsu02g04915 1238 Pfam Leucine rich repeat 580 639 IPR001611 GO:0005515
Tsu02g04915 1238 MobiDBLite consensus disorder prediction 885 902 - -
Tsu02g04915 1238 Gene3D Transferase(Phosphotransferase) domain 1 1026 1238 - -
Tsu02g04915 1238 MobiDBLite consensus disorder prediction 705 738 - -
Tsu02g04915 1238 PANTHER OS01G0253100 PROTEIN 478 1237 IPR045271 GO:0004714|GO:0006468
Tsu02g04915 1238 Gene3D Ribonuclease Inhibitor 497 599 IPR032675 -
Tsu02g04915 1238 ProSiteProfiles Leucine-rich repeat profile. 580 603 IPR001611 GO:0005515
Tsu02g04915 1238 SUPERFAMILY L domain-like 490 698 - -
Tsu02g04915 1238 Gene3D Phosphorylase Kinase; domain 1 915 1025 - -
Tsu02g04915 1238 SUPERFAMILY Protein kinase-like (PK-like) 925 1222 IPR011009 -
Tsu02g04915 1238 Pfam Protein tyrosine and serine/threonine kinase 951 1220 IPR001245 GO:0004672|GO:0006468
Tsu02g04915 1238 Gene3D Ribonuclease Inhibitor 600 718 IPR032675 -
Tsu02g04915 1238 MobiDBLite consensus disorder prediction 881 903 - -
Tsu02g04915 1238 MobiDBLite consensus disorder prediction 760 774 - -
Tsu02g04915 1238 Pfam Leucine rich repeat N-terminal domain 492 531 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04915 Tsu-Chr2 58179025 58189164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04915 485 1229 Strubbelig Receptor Gene Family AT4G03390 62.055 0.0 862
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Tsu02g04915 PK_Tyr_Ser-Thr 1.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04915 - - mtr:MTR_2g090120 1246.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04915 02 58179025 58189164 Tsu02g04915 02 58179025 58189164 ECH
Tsu02g04915 02 58179025 58189164 Tsu06g01119 06 10129288 10140177 PCT