Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04889 ATGAAGGTGATAGAACAAAGTCAAGTTTCGCCACCACCCAATTCAGTTCCATCACCAACCATCCTTCCCTTAACTTTCTTCGACTTTCCATGGTTTTACTGTCACCCGATTCATCGCATATTCTTCTACCACTTTCCTCATCCAACTCATCACTTTCTTCAAACAACACTTCCCATTCTCAAACACTCACTTTCCTTAACCCTCCAACACTTCTTCCCCTTCTCCTCCAACCTCATCATCCCGCAAAATTCCCAAGATGCCCCTTACATACGTTACCTCAATACCGACTCTCTCTCTTTCACCGTTGCTGAATCCTCAGCAGACTTCAACCTCCTCATATCTGATTCACAAGATGCTCAAAATTGGCACCCTCTTGTTCCAAATTTGCCTCCACCTAGTACTGAACAGAACAATACACGAGTCATTCCAATAATGGCCATACAAGTCACCGTTATGCCGAACTCTGGCTTATCTATATGTCTCACTTTCAACCATGTTGCTGCAGATGGAAAATCACTTCACCATTTCATGAAATTTTGGGCCTCTGTTtcaaaaaacagagtaaacaaCAACGTTTTGTCTCTTGAAGAGTCTCTGCCTATGCCTCCCGATCTACCTTCGCACGAAAGAGATAGAGTTAAAGATCCAAAGGGTCTTAAACATATCTACTTAAAAGAACTACAAGATTTTGATTCCAAAAACTTGGAATTCGCGGGTCTAGTTCGAGATTCTTATGTTAATAAGATACGAACAACTTTGGTTTTGAGCTTTGGACAAGTTCAGAAACTGAAGAAATGGGTAGCTGAAAAATGTAAAGAGAGTCATGGTGGAACACAGCATGTGTCAACTTTTGTTGTGACAAGTTCCTTGATTTGGTTCTGTATGATAAAATCAGAGCAAAATAAAGGTgaatatgttgatgatatctgCTACTTTGTGTTTCTTGCAGATTGTCGTGATAGCGCCGAATTTGCATTACCAAAAACTTATTTTGGAAATTGTATTGCATCTTATACTGTGGCTTTAAAGAGAGATGAGTTAGTTGGAAAAGATGGGATTGTTGTGGCTGCAAAGggtattgaaaagaaaataacagaTTTTAAAAGTAATGCTTTGTTAGGAGCTGAATCTTTGATGTCTGATTATAGGGATTTATCGAAGCCGGGTACGTCTCTTGTAGTAGTTGCTGGATCACCTAAACTTGCTGTTTATGAGACTGATTTTGGTTGGGGTAAGCCTAAGAAATCTGATGCAGTTCATCTTGATTCTTCCGGGTCAATATCTCTTTCTGATTGTAGAGATGGTGGAAACGGAATTGAGATTGATCTGGAAGAATCAAATATCAAGGCAGTGCAACAATATGAGCCACCGCTGAACAAGGATATGAGCAACAACAACGACGACAACGTGAACCAACCCAAACCACTGTCGTTTGAATAG 1440 0.3882 MKVIEQSQVSPPPNSVPSPTILPLTFFDFPWFYCHPIHRIFFYHFPHPTHHFLQTTLPILKHSLSLTLQHFFPFSSNLIIPQNSQDAPYIRYLNTDSLSFTVAESSADFNLLISDSQDAQNWHPLVPNLPPPSTEQNNTRVIPIMAIQVTVMPNSGLSICLTFNHVAADGKSLHHFMKFWASVSKNRVNNNVLSLEESLPMPPDLPSHERDRVKDPKGLKHIYLKELQDFDSKNLEFAGLVRDSYVNKIRTTLVLSFGQVQKLKKWVAEKCKESHGGTQHVSTFVVTSSLIWFCMIKSEQNKGEYVDDICYFVFLADCRDSAEFALPKTYFGNCIASYTVALKRDELVGKDGIVVAAKGIEKKITDFKSNALLGAESLMSDYRDLSKPGTSLVVVAGSPKLAVYETDFGWGKPKKSDAVHLDSSGSISLSDCRDGGNGIEIDLEESNIKAVQQYEPPLNKDMSNNNDDNVNQPKPLSFE 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04889 479 Gene3D - 1 238 IPR023213 -
Tsu02g04889 479 Pfam Transferase family 16 451 - -
Tsu02g04889 479 MobiDBLite consensus disorder prediction 443 479 - -
Tsu02g04889 479 Gene3D - 246 454 IPR023213 -
Tsu02g04889 479 MobiDBLite consensus disorder prediction 457 479 - -
Tsu02g04889 479 PANTHER COUMAROYL-COA:ANTHOCYANIDIN 3-O-GLUCOSIDE-6''-O-COUMAROYLTRANSFERASE 1-RELATED 1 443 - -
Tsu02g04889 479 PANTHER - 1 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04889 Tsu-Chr2 57986814 57989645 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04889 40 454 Monolignol Biosynthesis Gene Families AT5G48930 23.218 1.56e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04889 - - mtr:MTR_2g089670 615.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04889 02 57986814 57989645 Tsu02g04889 02 57986814 57989645 ECH