Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04886 ATGGTGAAGGTGATAGAGCAGAGTCAAGTTGCACCACCACCTGGTTCACTTCCATCACCAACCACACTCCCTCTCACCGTCTTCGACACTACATGGTTCTACTGTCAATACCCCGTTAAACGCATATTCTTCTATCACTTTCCTCATCCAACTCATCatttccttcaaacaacacttCCCATTCTCAAACACTCTCTTTCCTTAACCCTCCAACACTTCTTCCCCTTCTCCTCCAACCTCATCATCCCTTCAGATTCCCAAACTGAACCTTACATACGTTACCTCCACACCGACTCTCTCTCCTTCACCGTAGCTGAATCCTCGGCAGACTTCAACCTCCTCATATCAGATTCACAAGATGCTAAAAACTGGCACTCTCTTGTTCCAAATTTGCCTCCACCTAGTACTGAACAGAACAACACACGAGTCATTCCATTAATGGCCATTCAAGTTACTATTATGCCAAACTCCGGCTTATCAATCTGTCTCGCGTTCAAACATGTAGCTGCAGACGGAAAATCACTTCACCATTTCATGAAATTTTGGGCCTCTGTTTCAAAAAACAGagcaaacaacaaaaacaattcGTCTATTGAACACTCTCTGCCTCTCGAACTTGATCTTCCTTCCCATGAAAGACATACAATACTTAATACCCCAAAGGATCCTAATATAACCTATTTACAAAAAGTGGAATTCGCAGGTCTCATTCCAGATGATTATCCTAAGAACGTACGGATTTGTTTAGTGTTGAGTCATGAACAAGTTCAGAAACTGAAGAAGTGGATCATTGATAAATGCATAGAAACAATACAACACATGTCAACTTTTGTGGTAACATGTTCCTTGATTTGGTTTTGTATGGTAAAATCAGAGCATGTTGCTGTTGGTGATGATCTATGCAACTTCCTGTTTTATGCAGATTGTCGCCGTCGTCCTGAATTTTCATTATCAAAAGCTTATTTTGGAAATTGTCTTGCATCTTATATTGTGGCTGTAAAGAGAAGTGAGTTAGTTGGAAAAAACGGCATTGTTGTGGCAGCAAATGGTATTGAAAAGAAGATAAGAGGTTTCAAAAGTGATGCTGCATTAGGTTCTGAAACGATGATGCTTGATTATAAGGAATTAATTAAACCAGGTAAGTCTATTGTAATGGTTTCTGGATCACCTAAACTTGATGTTTATGAGACTGATTTTGGGTGGGGGAAGCCTAAGAAATCTGATGTAGTTCATCATGATTCGTCTGGTATAATTTCTCTATCTGATTGTAGAGATGGTGGAAGCGGAATTGAGATCGGTTTGTCCCTCGAAAGGTCTCGAATGGCTAATTTCATGAACATCTTTCATGAACAACTTAATATTTGTAGCATGTGA 1374 0.3894 MVKVIEQSQVAPPPGSLPSPTTLPLTVFDTTWFYCQYPVKRIFFYHFPHPTHHFLQTTLPILKHSLSLTLQHFFPFSSNLIIPSDSQTEPYIRYLHTDSLSFTVAESSADFNLLISDSQDAKNWHSLVPNLPPPSTEQNNTRVIPLMAIQVTIMPNSGLSICLAFKHVAADGKSLHHFMKFWASVSKNRANNKNNSSIEHSLPLELDLPSHERHTILNTPKDPNITYLQKVEFAGLIPDDYPKNVRICLVLSHEQVQKLKKWIIDKCIETIQHMSTFVVTCSLIWFCMVKSEHVAVGDDLCNFLFYADCRRRPEFSLSKAYFGNCLASYIVAVKRSELVGKNGIVVAANGIEKKIRGFKSDAALGSETMMLDYKELIKPGKSIVMVSGSPKLDVYETDFGWGKPKKSDVVHHDSSGIISLSDCRDGGSGIEIGLSLERSRMANFMNIFHEQLNICSM 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04886 457 Pfam Transferase family 3 446 - -
Tsu02g04886 457 Gene3D - 1 234 IPR023213 -
Tsu02g04886 457 PANTHER - 1 453 - -
Tsu02g04886 457 Gene3D - 242 455 IPR023213 -
Tsu02g04886 457 PANTHER COUMAROYL-COA:ANTHOCYANIDIN 3-O-GLUCOSIDE-6''-O-COUMAROYLTRANSFERASE 1-RELATED 1 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04886 Tsu-Chr2 57969253 57970626 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04886 42 441 Monolignol Biosynthesis Gene Families AT5G48930 22.143 5.23e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04886 - - mtr:MTR_2g089670 641.728