Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04885 ATGGCAGAGCTTATAGGAACAAATCATAAGCTTATTGAACAAACTATGATTTTTCCATCATCAACAACAGAAATTTCTCTTCCTCTTACATTTCTTGATTTACCTTTAGCAGGTCCAATCTATGTTCGACGCCAATTCTTCTATCGATTTCCTCATTCAACAAACGATTTTTGCGAAACAACATTTCCATCTCTCAAAGAATCATTATCTCTCACTCTTCAACATTTCTTTCCTCTTGCTGGAAATCTCATCTCTCCACCATCACCAAACAAACCCTTCATTCTCTGCACTGATAAAGACTCTGTCCCTTTTACCATCGTCGAATCTTCCGAAGATTTCAACCATCTTTCAGCAAATTACCAcccaaaaaatatcaaagaCTTTAACCATCTTGTTCCAAAATTAACACATAAAACAATCCATGATGAAAATGACAATGACAATGAAAATGACACTTTTGTCTTTCCTTTGTTGTCTTTGCAAGCTTCTGTTTTTCCTAACATTGGTCTATGCATTGCAATCACATATTGTCATGTTATGGATGATAGTTGTTGTAGTGATTTCATGAAGACTTGGTCTTTTTTTCATAGAAAGTGTGAAAGTGTTGACTTGAAGTCAACGCCTTGTTTTGATAGAGAAATTTTGAGGGACCCAAAAGGGTTTGTTGAGAATGTTTTCTTAAGAGACtattttgaagaaagaaaaacatggAAGCATAAACCCATTGGTCAAACTCAAATTCAAAGTCAAACTATTGAAGAACATCAAAAAGTTGAAGAATATTTTAAAGCAACTATTGTTTTTACAAAAGAAGAAATTGAGAGAATGAAAAAATGGGTACTTACTCAAtggaagaaaaatgataatGAAACTATCAAGCCACAATTTTTATCTAAATTTGTTGTAACTTGTGGTTTTATTTGGGCTAGTTTGGTTAAAACAAGATATAGAAATGATAAcaatgatgaaaaagaagagtttTTTCGTTTTGCAGGTGATTGTAGAGATAGACTTGGGTACAAAATACCAGAAGGGTATTTTGGTAATTGTCTAACACTATGTCATGCAACAGTGAAGAGAAAAGATATGAAGGGTGAAGATGGTTTTGTGAAAGCTGTTAAGGTAATTGAAAGGGCAATAAGGGAAATGAAAAATGAACCTTTTAAAGATGTAGAAGAATGGAGAGAAACATTTAAGAAGATGTTTGAATTTGGAAGTGTTTTGTTAGTGACAGGTTCACCTAAGTTTAATGTTTATGAGACtgattttggatttggaaaACCTGTTAAAGTTGAAATGGTACATTCTTTTAAGTGTATGTCTATTGCTGAAAGTGGAGATAGAGATGGTGGAATTGAGGTTGGTTTGGTATTCAAAAGTggtgaatttgaatatttttgttcTGTTATTGAACAAGGACTTGAAGGTTTTAAATCCTAA 1440 0.3069 MAELIGTNHKLIEQTMIFPSSTTEISLPLTFLDLPLAGPIYVRRQFFYRFPHSTNDFCETTFPSLKESLSLTLQHFFPLAGNLISPPSPNKPFILCTDKDSVPFTIVESSEDFNHLSANYHPKNIKDFNHLVPKLTHKTIHDENDNDNENDTFVFPLLSLQASVFPNIGLCIAITYCHVMDDSCCSDFMKTWSFFHRKCESVDLKSTPCFDREILRDPKGFVENVFLRDYFEERKTWKHKPIGQTQIQSQTIEEHQKVEEYFKATIVFTKEEIERMKKWVLTQWKKNDNETIKPQFLSKFVVTCGFIWASLVKTRYRNDNNDEKEEFFRFAGDCRDRLGYKIPEGYFGNCLTLCHATVKRKDMKGEDGFVKAVKVIERAIREMKNEPFKDVEEWRETFKKMFEFGSVLLVTGSPKFNVYETDFGFGKPVKVEMVHSFKCMSIAESGDRDGGIEVGLVFKSGEFEYFCSVIEQGLEGFKS 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04885 479 PANTHER - 7 479 - -
Tsu02g04885 479 Gene3D - 9 241 IPR023213 -
Tsu02g04885 479 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 7 479 - -
Tsu02g04885 479 Gene3D - 259 477 IPR023213 -
Tsu02g04885 479 Pfam Transferase family 12 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04885 Tsu-Chr2 57966686 57968125 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04885 13 466 Monolignol Biosynthesis Gene Families AT5G48930 23.983 6.83e-16 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04885 - - aprc:113855905 613.609