Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04875 ATGTTCAATACAAAGAAGACATGTTTCTTGCTTTATCTTCTCAACCTCATCTTCTCTTTACAGTCCTATATTTCCCATGCTGCTATAACTACAATCTCTGCAAACCAATCTCTCTCTGGTGATCAAACTCTAGTCTCTGAAGGGGGAATCTTTGAATTGGGTTTCATTAAACCAGGTACATATTCTAACTACTACATAGGGATATGGTACAAAAAGATCAAGGTACAAACAATTGTTTGGGTAGCCAATAGAGACAACCCTGTCTCTGATAAATACACTGCCACTTTAAGAATATTAGACGGTAATTTAGTTCTATTAAATGAGTCTTCAAAACAAGTTTGGTCAACAAATATGAGTTCTTCTAATATTGGTTCTGTTGTAGCTATCCTCCTAGATAGTGGAAATCTTGTTTTAAGAAATAGGCCTGATGATGATGCAATAGATCCTCTATGGCAAAGTTTTGATCACCAAACAAATATGTTTCTTCCGGGTGGAAAAATTAAGCTGGACAAGAAAACAAAGCAGCCTCAGTATCTTACTTCATGGAAGAATAATGAAGATCCTTCAACGGGTCTTTTCTCTTTGGAATTAGACCCAAAAGGAACAACTTCATATCTTATTCTTTGGAATAAGTCTGAACAGTATTGGACAAGTGGACCTTGGAATGGACAGATTTTTAGTTTGATTCCTGAGATGAGGTCAAATTACATTTACAATTTTTCATTTGTGTCGAACGAGAATGAGAGCTATTTCACTTACTCACTGTATGACCCTTCCTTTCTATCTCGGCTTGTGATGGATGTCTCGGGCCAGATTAAGCAATTAACATGGTTGGAAAGTTCCCAACAATGGAACCTCTTTTGGACACAGCCAAGAGGACAATGTGAGGTTCATTCTTTTTGCGGTCCATTTGGGAGCTGTTCTGAACTCTCAACGACTTATTGTAGTTGTTTGAGAGGTTTTGAGCCAAAGTCAGTAACTGATTGGAATCTGGAGGATTACTCAGGTGGGTGTGTCAGGAAAACAAGTTTGCAATGTGAGGATAATGAGGGGTTCCTTGCAATCCCCAATATGGCATTACCTAAACATGCACAATTTGTGGGGTTAGGTAACGCAGCTGAATGTGAAATTACTTGCTTGAAAAACTGCTCTTGCACTGCTTATGCATATGATAGTAATGGATGTTCAATTTGGATCGGAGACCTCATTAATCTGCAACTATTGTCTTCTGATGATAGTAGTGGAAAAATTTTGTATGTCAAACTTGCAACATCAGAATTTCATGATGCTAGTAAAAACAGTTATCGGGCGAGGGTGATTATTGGTGGTGTTGTGGGTGCGGTTATAGGCATTGGGATACTCTTGGCCCTTTTATTGCTTGTTATGCTTAGGCGAAGAAAGAGAACACTTGCAAATGGAAATCTCTTGGAGGATTTTACGGTGGAATTTGGGTACAAGGATTTGCAAAGCGCGACTAAGAATTTCTCCGAGAAATTGGGAGGAGGAggtttttgttctgttttcaaAGGAACATTATCCGATTCAAGTGTGGTTGCAGTGAAGAAGCTGGAGGTTGTTAGCCAAGGAGAGAAGCAATTCAGAACAAAAGTGAGTATTATAGGGACAATGCAACATGTTAATCTTGTTCGCCTCCGTGGATTCTGCTCAGAGGGTACCAAAAGGTTGCTGGTTTATGATTACATGACAAATCGTTCCTTGGATTTTCATTTGTTCTTGAAGGATTCTTCTGAGGTGTTGGACTGGAAAATGAGATACCAAATTGCTCTTGGAATTGCAAGGGGACTAATTTATCTCCATGAGAAATGTGAAGATTGTATCATTCACAATGATATAAAGCCAGAAAACATTCTACTTGATGCTGATTTTTGTCCAAAAGTTGCGGACTTTGGTCTAGCTAAGCTAATTGGACGGGATTTCAACAAGATCCTTACTACAATGAAGGGAACAAGAGGCTATCTTTCCCCGGAGTGGTTATCTAGGGCTGCTATCACAGCAAAATCTGATGTTTACAGCTACGGAATGATGCTTTTTGAGGTTGTATCAGGTAGGAGAAACTCTGATCCATCTGCAGATGGCCAAGTTATTTTCTTCCCTACCTTGGCTGCAGAAGTAGTTAACCAAGGTGGTAGTGTCCTTAGCCTTTTGGACCCTAGGTTGGAGGGAAATGCTAACATTGAGGAGGTGACCGAAATGCTAAAAGTTGCTTCTTGGTGTGTCCAAGAAAATGAAACTCAGAGGCCAACCATGCGTCAGGTAGTTCAAATTCTTGAGGGGATCTTGGATGTGAATTTGCCACCAATTCCAAGATTCAATCCAAGATTCAATCAAGTATTTGTAGATAACTAA 2367 0.3925 MFNTKKTCFLLYLLNLIFSLQSYISHAAITTISANQSLSGDQTLVSEGGIFELGFIKPGTYSNYYIGIWYKKIKVQTIVWVANRDNPVSDKYTATLRILDGNLVLLNESSKQVWSTNMSSSNIGSVVAILLDSGNLVLRNRPDDDAIDPLWQSFDHQTNMFLPGGKIKLDKKTKQPQYLTSWKNNEDPSTGLFSLELDPKGTTSYLILWNKSEQYWTSGPWNGQIFSLIPEMRSNYIYNFSFVSNENESYFTYSLYDPSFLSRLVMDVSGQIKQLTWLESSQQWNLFWTQPRGQCEVHSFCGPFGSCSELSTTYCSCLRGFEPKSVTDWNLEDYSGGCVRKTSLQCEDNEGFLAIPNMALPKHAQFVGLGNAAECEITCLKNCSCTAYAYDSNGCSIWIGDLINLQLLSSDDSSGKILYVKLATSEFHDASKNSYRARVIIGGVVGAVIGIGILLALLLLVMLRRRKRTLANGNLLEDFTVEFGYKDLQSATKNFSEKLGGGGFCSVFKGTLSDSSVVAVKKLEVVSQGEKQFRTKVSIIGTMQHVNLVRLRGFCSEGTKRLLVYDYMTNRSLDFHLFLKDSSEVLDWKMRYQIALGIARGLIYLHEKCEDCIIHNDIKPENILLDADFCPKVADFGLAKLIGRDFNKILTTMKGTRGYLSPEWLSRAAITAKSDVYSYGMMLFEVVSGRRNSDPSADGQVIFFPTLAAEVVNQGGSVLSLLDPRLEGNANIEEVTEMLKVASWCVQENETQRPTMRQVVQILEGILDVNLPPIPRFNPRFNQVFVDN 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04875 788 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 7 787 - -
Tsu02g04875 788 Gene3D Phosphorylase Kinase; domain 1 459 567 - -
Tsu02g04875 788 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 7 787 - -
Tsu02g04875 788 SMART blect_4 35 157 IPR001480 -
Tsu02g04875 788 CDD STKc_IRAK 499 766 - -
Tsu02g04875 788 CDD B_lectin 35 156 IPR001480 -
Tsu02g04875 788 Pfam D-mannose binding lectin 77 183 IPR001480 -
Tsu02g04875 788 Pfam S-locus glycoprotein domain 216 325 IPR000858 GO:0048544
Tsu02g04875 788 ProSiteProfiles PAN/Apple domain profile. 346 423 IPR003609 -
Tsu02g04875 788 CDD PAN_AP_plant 342 423 - -
Tsu02g04875 788 SUPERFAMILY Protein kinase-like (PK-like) 481 777 IPR011009 -
Tsu02g04875 788 ProSiteProfiles Bulb-type lectin domain profile. 29 151 IPR001480 -
Tsu02g04875 788 ProSiteProfiles Protein kinase domain profile. 493 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04875 788 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Tsu02g04875 788 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 223 IPR036426 -
Tsu02g04875 788 SMART ntp_6 347 422 IPR003609 -
Tsu02g04875 788 SMART serkin_6 493 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04875 788 Gene3D - 23 155 IPR036426 -
Tsu02g04875 788 Pfam PAN-like domain 346 405 IPR003609 -
Tsu02g04875 788 PIRSF SRK 2 784 IPR024171 GO:0004674
Tsu02g04875 788 Gene3D Transferase(Phosphotransferase) domain 1 568 771 - -
Tsu02g04875 788 Pfam Protein kinase domain 496 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04875 Tsu-Chr2 57875755 57878402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04875 482 773 Receptor kinase-like Gene Family AT5G20050 43.182 4.50e-75 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tsu02g04875 Pkinase 5.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04875 - - gmx:100782119 1086.25