Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04874 ATGTTCAATAGAATGAAGACATGTTTCTTGCTTTATCTTCTCAACCTCATCTTCTCTTTACAGTCCTATCTTTCCCATGCAGCTATAACTACAATCTCAGCAAACCAATCTCTCTCTGGTGATCAAACTCTAGTCTCTGAAGGGGGAATCTTTGAATTGGGATTCTTTAAACCAGGTAAATATTCTAACTACTACATAGGCATATGGTACAAAAAGATCAGTGAACAAACAATTGTTTGGGTAGCCAATAGAGACAACCCTGTCTCTGATAAATACACTGCCACCTTAGAAATATCAGCTGGTAATTTAGTTCTATTCAATAAGCCTTCAAAACTAGTTTGGTCAACAAACATAAGTTCTTCTAACTCAGGTTCTGTAGTAGCTATCCTCCTAGATAGTGGAAATCTTGTTTTAAGAAATAGGCCTGATGATGATGCAATAGATCCTCTATGGCAGAGTTTTGATTACCAAACAAATACGTTTCTTCCGGGTGGAAAAATTAAGCAGGCCAAGAAAACAACGCAGCCTCAATATCTTACTTCATGGAAGAATAATGAAGATCCTTCAACGGGTCTTTTCTCTTTGGAACTAGACCCAAAAGGAACATATTCATATCTTATTGTTTGGAATAAGTCTGAACAGTATTGGACAAGTGGACCTTGGAATGGACGAAGTTTTAGTCTGGTTCCAGAGATGGGGTCAAATTACAACAATTTTGTATTTGTGTTGAACCAGAATGAGAGTTATTTCACTTACTCAGTGAATGACCTTTCCATTCTATCACGGTTTGTGATGGATGTCTCAGGACAGATTAAGCAATATACATGGTTGGAAAGTACCCAACAATGGAACCTCTTTTGGTCACAGCCACGAGGACAATGTGAGGTTCATTCTTTCTGCGGTCCATTTGGGAGCTGTTCTGAAAACTCAATGACTTATTGTAGTTGTTTGAGAGGTTTTGAGCCAAAATCAGTGTCTGATTGGAATCTGGAGGATCACTCAGGTGGGTGTGTTAGAAAAACAAGTTTGCAATGCGAGGGTTCTGATCACTCTAATAGGGATAATGAGGGGTTCCTTGCAATCCACAATATGGCATTACCAAACAATGCACAATTTGTGGGGTTAGGGAATGCAGTTGAATGTGAATTAACTTGCTTCAAAAACTGCTCCTGCATTGCTTATGCATATGATAGTAATGGATGTTCAATTTGGAACGGAGGCCTAATTGATGTGCAACTATTGTCTTCTGATGATAGTAGTGGAAAAATTTTGTATCTCAAACTTGCAACATCAGAATTCCGTGATTCTAGTAAATTCAGTTATCGGGCGAGGGTGATTATTGGTGTTGTGGGAGCGGTTATTGGCATAGGGATATTCTTGGCCCTTCTATTGTTTGTTAGGCTTaggcaaaaaaagaaaatgcttGCAACTGGAAACCTCTTGGAGGGTTTTATGGTGGAATTTGGGTACAAGGATTTGCAAAGCGCGACTAAGAATTTCTCCGAGAAATTGGGAGGAGGAGGTTTTGGTTCTGCTTTCAAAGGAACGTTAGCTGATTCTAGTGTGGTCGCAGTGAAGAAGCTGGAGGGTGTTAGCCAAGGAGAGAAGCAGTTCAGAACAAAAGTGAGTATAGTAGGGACAATGCAACATGTTAATCTTGTTCGCCTCCGTGGATTCTGCTCAGAACGTACCAAAAGGTTGCTGGTTTATGATTACATGACAAATCGTTCCTTGGATTTTCATTTGTTCTTGAAGAATGATTCTTTTGAGGTGTTGGACTGGAAAATGAGATACCAAATTGCTCTTGGAATTGCAAGGGGACTAATTTATCTCCATGAGAAATGTGAAGATTGTATGATACACAATGATATAAAACCAGAAAACATTCTACTTGATGCTGATTTTTGTCCAAAAGTTGCGGACTTTGGTCTAGCTAAGCTAATTGGACGGGATTTCAACAAGATCCTTACAACAATGAAGGGAACAAAAGTTTATCTTGCTCCGGAGTGGTTATCTAGGGCTGCTATCACAGCCAAATCTGATGTTTACAGCTATGGAATGATGCTTTTTGAGGTTGTATCAGGTAGGAGAAACTCAGATTGTCAAGTTACTTTCTTTCCTACCTTGGCTGCAGAAGTAGTTAACCAAGGAGGTAGTGTCCTTAGCCTGTTGGACCCTAGGTTGGAGGGAAATGCTAACATTGAGGAGGTGACTGAAATGCTAAAAGTTGCCTCTTGGTGTGTCCAAGAAAATGAAACTCAGAGGCCAACCATGCGTCAGGTAGTTCAAATTCTTGAGGGGATCTTGGATGTGAATTTGCCACCAATTCCGAGATTCAATCAAGTGTTTGTAGATGACTAA 2361 0.3952 MFNRMKTCFLLYLLNLIFSLQSYLSHAAITTISANQSLSGDQTLVSEGGIFELGFFKPGKYSNYYIGIWYKKISEQTIVWVANRDNPVSDKYTATLEISAGNLVLFNKPSKLVWSTNISSSNSGSVVAILLDSGNLVLRNRPDDDAIDPLWQSFDYQTNTFLPGGKIKQAKKTTQPQYLTSWKNNEDPSTGLFSLELDPKGTYSYLIVWNKSEQYWTSGPWNGRSFSLVPEMGSNYNNFVFVLNQNESYFTYSVNDLSILSRFVMDVSGQIKQYTWLESTQQWNLFWSQPRGQCEVHSFCGPFGSCSENSMTYCSCLRGFEPKSVSDWNLEDHSGGCVRKTSLQCEGSDHSNRDNEGFLAIHNMALPNNAQFVGLGNAVECELTCFKNCSCIAYAYDSNGCSIWNGGLIDVQLLSSDDSSGKILYLKLATSEFRDSSKFSYRARVIIGVVGAVIGIGIFLALLLFVRLRQKKKMLATGNLLEGFMVEFGYKDLQSATKNFSEKLGGGGFGSAFKGTLADSSVVAVKKLEGVSQGEKQFRTKVSIVGTMQHVNLVRLRGFCSERTKRLLVYDYMTNRSLDFHLFLKNDSFEVLDWKMRYQIALGIARGLIYLHEKCEDCMIHNDIKPENILLDADFCPKVADFGLAKLIGRDFNKILTTMKGTKVYLAPEWLSRAAITAKSDVYSYGMMLFEVVSGRRNSDCQVTFFPTLAAEVVNQGGSVLSLLDPRLEGNANIEEVTEMLKVASWCVQENETQRPTMRQVVQILEGILDVNLPPIPRFNQVFVDD 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04874 786 ProSiteProfiles Bulb-type lectin domain profile. 29 151 IPR001480 -
Tsu02g04874 786 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 7 785 - -
Tsu02g04874 786 CDD PAN_AP_plant 341 429 - -
Tsu02g04874 786 Gene3D Phosphorylase Kinase; domain 1 464 572 - -
Tsu02g04874 786 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 222 IPR036426 -
Tsu02g04874 786 Pfam D-mannose binding lectin 77 183 IPR001480 -
Tsu02g04874 786 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 7 785 - -
Tsu02g04874 786 CDD B_lectin 35 156 IPR001480 -
Tsu02g04874 786 PIRSF SRK 2 786 IPR024171 GO:0004674
Tsu02g04874 786 ProSiteProfiles PAN/Apple domain profile. 345 429 IPR003609 -
Tsu02g04874 786 Pfam S-locus glycoprotein domain 216 324 IPR000858 GO:0048544
Tsu02g04874 786 Gene3D Transferase(Phosphotransferase) domain 1 573 773 - -
Tsu02g04874 786 SUPERFAMILY Protein kinase-like (PK-like) 484 766 IPR011009 -
Tsu02g04874 786 Gene3D - 23 155 IPR036426 -
Tsu02g04874 786 SMART blect_4 35 157 IPR001480 -
Tsu02g04874 786 ProSitePatterns Protein kinases ATP-binding region signature. 504 527 IPR017441 GO:0005524
Tsu02g04874 786 Pfam PAN-like domain 353 411 IPR003609 -
Tsu02g04874 786 CDD STKc_IRAK 504 768 - -
Tsu02g04874 786 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Tsu02g04874 786 SMART serkin_6 498 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04874 786 Pfam Protein kinase domain 501 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04874 786 SMART ntp_6 353 428 IPR003609 -
Tsu02g04874 786 ProSiteProfiles Protein kinase domain profile. 498 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04874 Tsu-Chr2 57870678 57873038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04874 423 775 Receptor kinase-like Gene Family AT5G20050 38.619 8.06e-76 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tsu02g04874 Pkinase 6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04874 - - gmx:100809852 1040.02